ABOUTMENU
HELP
NEWS
STARD7
BASAL GANGLIA - Expression summary
Protein expression
Caudatei
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:62.4 nTPM
HPA:62.4 nTPM
GTEx:54.7 nTPM
FANTOM5:73.3 Scaled Tags Per Million
Pig:8.5 nTPM
Mouse:71.8 nTPM
Allen mouse:7.3 Expression energy

CAUDATE - Antibody stainingi
Antibody HPA064978Antibody CAB033965
Glial cells LowLow
Neuronal cells MediumMedium





BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 62.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 49.2
2481 Female, age 94, left hemisphere 57.3
2288 Male, age 75, left hemisphere 54.2
2290 Female, age 72, unknown 49.8
1857 Female, age 85, left hemisphere 49.1
2846 Female, age 79, unknown 46.6
1854 Male, age 80, left hemisphere 46.1
1781 Male, age 74, unknown 45.3
2289 Male, age 61, right hemisphere 45.2
Claustrum
nTPM: 46.3
1956 Male, age 74, unknown 49.8
2392 Female, age 94, both hemispheres 49.7
2198 Male, age 80, both hemispheres 49.0
2292 Female, age 85, both hemispheres 48.9
2491 Male, age 75, both hemispheres 47.8
2196 Female, age 79, unknown 44.7
2568 Male, age 61, both hemispheres 43.7
2284 Female, age 91, both hemispheres 43.4
2645 Female, age 72, unknown 40.2
Globus pallidus, externus
nTPM: 58.8
1996 Male, age 80, right hemisphere 67.8
2395 Male, age 75, both hemispheres 64.4
2772 Female, age 79, unknown 59.6
2646 Male, age 61, right hemisphere 54.3
2567 Female, age 72, unknown 47.9
Globus pallidus, internus
nTPM: 62.4
2287 Male, age 75, right hemisphere 74.2
2778 Female, age 91, both hemispheres 65.0
2483 Female, age 94, right hemisphere 63.0
2111 Female, age 85, right hemisphere 62.9
1818 Male, age 74, unknown 60.6
2037 Male, age 80, right hemisphere 59.7
2566 Female, age 72, unknown 51.2
Nucleus accumbens
nTPM: 50.7
2391 Female, age 94, left hemisphere 58.7
2286 Male, age 75, left hemisphere 57.8
1806 Female, age 85, left hemisphere 52.1
1783 Male, age 74, unknown 49.6
2824 Male, age 61, right hemisphere 47.6
2732 Male, age 80, right hemisphere 47.2
2698 Female, age 72, unknown 47.1
1856 Female, age 91, right hemisphere 45.2
Nucleus basalis of Meynert
nTPM: 49.7
2569 Male, age 61, both hemispheres 56.3
2484 Female, age 94, left hemisphere 49.8
2393 Male, age 80, right hemisphere 46.9
2821 Male, age 75, both hemispheres 45.6
Nucleus of the diagonal band
nTPM: 48.3
1812 Female, age 91, both hemispheres 57.1
2775 Male, age 80, right hemisphere 49.0
2029 Male, age 61, right hemisphere 46.5
1979 Male, age 74, unknown 46.4
2195 Female, age 85, both hemispheres 42.4
Olfactory tubercle
nTPM: 43.1
1846 Male, age 80, right hemisphere 48.1
1998 Female, age 91, both hemispheres 43.4
2856 Male, age 75, right hemisphere 40.9
2487 Female, age 94, left hemisphere 40.1
Putamen
nTPM: 47.4
2482 Female, age 94, left hemisphere 54.6
1829 Male, age 74, unknown 50.0
2466 Female, age 79, unknown 47.3
2647 Male, age 75, left hemisphere 47.2
1838 Male, age 80, right hemisphere 45.8
1937 Female, age 91, right hemisphere 44.0
2489 Female, age 72, unknown 42.4
Septal nuclei
nTPM: 47.1
2031 Female, age 72, unknown 53.3
2009 Female, age 91, both hemispheres 48.1
2199 Male, age 80, right hemisphere 47.5
2629 Female, age 94, right hemisphere 46.3
1960 Male, age 74, unknown 45.3
2059 Female, age 85, both hemispheres 44.8
2394 Male, age 61, left hemisphere 44.7

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 54.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 54.7
Samples: 246

Max nTPM: 90.1
Min nTPM: 23.5
Std nTPM: 10.6
Median nTPM: 54.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 90.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 85.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 83.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 83.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 82.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 82.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 80.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 80.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 77.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 77.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 76.5
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 50.6
Samples: 246

Max nTPM: 78.2
Min nTPM: 11.0
Std nTPM: 13.2
Median nTPM: 51.7
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 78.2
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 77.8
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 77.6
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 76.9
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 76.7
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 76.7
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 76.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 73.2
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 72.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 72.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 71.7
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 54.5
Samples: 205

Max nTPM: 94.6
Min nTPM: 23.6
Std nTPM: 10.7
Median nTPM: 55.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 94.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 87.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 83.1
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 81.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 78.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 78.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 73.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 72.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 71.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 70.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 70.2
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 73.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 52.7
FF:10164-103B2 76 years, female 52.7
Globus pallidus
Scaled Tags Per Million: 73.3
FF:10161-103A8 76 years, female 86.0
FF:10175-103C4 60 years, female 60.7
Nucleus accumbens
Scaled Tags Per Million: 61.2
FF:10037-101F1 23-56 years, mixed 61.2
Putamen
Scaled Tags Per Million: 53.3
FF:10176-103C5 60 years, female 53.3

BASAL GANGLIA - Pig RNA-seqi
Average nTPM 8.5
Pig sample Sample description nTPM
Caudate
nTPM: 7.8
Samples: 4

Max nTPM: 8.7
Min nTPM: 7.3
Sample A Female 7.3
Sample B Female 7.4
Sample C Male 8.7
Sample D Male 7.9
Putamen
nTPM: 7.5
Samples: 4

Max nTPM: 8.4
Min nTPM: 6.2
Sample A Female 7.8
Sample B Female 6.2
Sample C Male 8.4
Sample D Male 7.6
Septum
nTPM: 8.5
Samples: 4

Max nTPM: 9.4
Min nTPM: 7.6
Sample A Female 9.4
Sample B Female 7.6
Sample C Male 9.3
Sample D Male 7.6
Ventral pallidum
nTPM: 8.2
Samples: 4

Max nTPM: 8.6
Min nTPM: 7.7
Sample A Female 8.6
Sample B Female 7.7
Sample C Male 8.0
Sample D Male 8.5

BASAL GANGLIA - Mouse RNA-seqi
Average nTPM 71.8
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 65.1
Samples: 4

Max nTPM: 70.7
Min nTPM: 58.2
Sample A Male 61.1
Sample B Male 58.2
Sample C Female 70.3
Sample D Female 70.7
Septum
nTPM: 71.8
Samples: 4

Max nTPM: 74.2
Min nTPM: 69.6
Sample A Male 74.2
Sample B Male 72.0
Sample C Female 69.6
Sample D Female 71.5
Ventral forebrain
nTPM: 69.4
Samples: 4

Max nTPM: 71.6
Min nTPM: 65.7
Sample A Male 71.6
Sample B Male 68.9
Sample C Female 65.7
Sample D Female 71.5

BASAL GANGLIA - Allen Mouse ISHi
Max Expression energy 7.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 6.3
74800953 Antisense, RP_060315_02_A10, Mouse strain C57BL/6J (56 days, male) 7.6
68193038 Antisense, RP_040825_01_H05, Mouse strain C57BL/6J (56 days, male) 4.9
Pallidum
Expression energy: 7.3
74800953 Antisense, RP_060315_02_A10, Mouse strain C57BL/6J (56 days, male) 10.1
68193038 Antisense, RP_040825_01_H05, Mouse strain C57BL/6J (56 days, male) 4.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.