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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:19.8 nTPM
HPA:19.8 nTPM
GTEx:44.5 nTPM
FANTOM5:51.1 Scaled Tags Per Million
Pig:5.9 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody CAB005361
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 19.8
Sample id Sample description nTPM
Hippocampus
nTPM: 18.6
1898 Male, age 80, left hemisphere 19.6
1911 Female, age 85, right hemisphere 18.9
2529 Female, age 94, left hemisphere 18.8
1855 Male, age 76, left hemisphere 18.5
2148 Female, age 91, left hemisphere 18.1
2621 Female, age 67, right hemisphere 17.8
Dentate gyrus
nTPM: 19.0
2246 Female, age 85, both hemispheres 20.1
2528 Male, age 74, both hemispheres 19.9
2010 Male, age 76, both hemispheres 18.6
2530 Female, age 94, left hemisphere 18.6
1927 Female, age 91, both hemispheres 18.5
2531 Female, age 67, both hemispheres 18.2
Entorhinal gyrus
nTPM: 18.2
1938 Female, age 85, left hemisphere 19.2
1787 Male, age 76, left hemisphere 18.5
2613 Female, age 94, left hemisphere 18.4
2764 Male, age 80, right hemisphere 17.7
2117 Female, age 91, right hemisphere 17.6
2686 Male, age 75, right hemisphere 17.6
Hippocampus, CA1
nTPM: 19.8
2527 Male, age 74, both hemispheres 21.4
2045 Male, age 76, both hemispheres 20.4
2749 Male, age 80, left hemisphere 20.0
1873 Female, age 85, both hemispheres 19.5
2082 Female, age 91, right hemisphere 17.5
Hippocampus, CA2
nTPM: 18.7
2249 Male, age 74, both hemispheres 19.7
1940 Female, age 85, left hemisphere 19.2
2113 Female, age 91, right hemisphere 18.9
1892 Male, age 76, both hemispheres 18.8
2437 Female, age 94, left hemisphere 18.1
1963 Male, age 80, left hemisphere 17.2
Hippocampus, CA3
nTPM: 18.7
2137 Male, age 80, left hemisphere 20.0
1891 Female, age 85, both hemispheres 19.4
2436 Male, age 74, both hemispheres 19.2
1867 Male, age 76, both hemispheres 18.4
2861 Female, age 67, both hemispheres 18.0
2620 Female, age 94, left hemisphere 17.2
Parahippocampal cortex
nTPM: 18.4
1933 Female, age 85, both hemispheres 19.5
2692 Male, age 74, both hemispheres 19.1
2250 Female, age 67, right hemisphere 18.9
2693 Female, age 94, both hemispheres 18.8
2245 Female, age 91, both hemispheres 18.6
2018 Male, age 76, both hemispheres 18.5
1850 Male, age 80, both hemispheres 18.0
2532 Female, age 72, left hemisphere 17.7
2622 Female, age 67, right hemisphere 17.5
1990 Female, age 91, right hemisphere 17.1
Perirhinal gyrus
nTPM: 18.9
2848 Male, age 76, right hemisphere 19.4
1841 Female, age 85, right hemisphere 19.2
1794 Male, age 80, right hemisphere 19.1
2521 Female, age 94, right hemisphere 18.9
1847 Female, age 91, left hemisphere 18.0
Subiculum
nTPM: 18.6
1901 Male, age 80, both hemispheres 19.5
2042 Male, age 76, both hemispheres 19.3
2729 Female, age 91, right hemisphere 18.7
2438 Female, age 94, left hemisphere 18.6
1977 Female, age 85, both hemispheres 17.6
2619 Male, age 74, both hemispheres 17.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 44.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 44.5
Samples: 197

Max nTPM: 115.6
Min nTPM: 23.1
Std nTPM: 11.3
Median nTPM: 42.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 115.6
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 75.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 73.1
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 67.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 67.6
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 66.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 65.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 63.4
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 63.3
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 62.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 62.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 51.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 51.1
FF:10169-103B7 60 years, female 57.5
FF:10153-102I9 76 years, female 44.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 5.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 5.9
Samples: 4

Max nTPM: 6.4
Min nTPM: 5.6
Sample A Female 5.8
Sample B Female 5.9
Sample C Male 6.4
Sample D Male 5.6
Entorhinal cortex
nTPM: 5.4
Samples: 4

Max nTPM: 6.1
Min nTPM: 4.6
Sample A Female 4.6
Sample B Female 5.4
Sample C Male 5.4
Sample D Male 6.1
Subiculum
nTPM: 5.5
Samples: 4

Max nTPM: 6.2
Min nTPM: 4.9
Sample A Female 4.9
Sample B Female 5.7
Sample C Male 5.3
Sample D Male 6.2
Ventral hippocampus
nTPM: 5.6
Samples: 4

Max nTPM: 6.4
Min nTPM: 4.7
Sample A Female 6.4
Sample B Female 5.6
Sample C Male 4.7
Sample D Male 5.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.