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AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:41.3 nTPM
HPA:41.3 nTPM
GTEx:45.0 nTPM
FANTOM5:33.5 Scaled Tags Per Million
Pig:21.3 nTPM
Mouse:53.5 nTPM
Allen mouse:0.5 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 41.3
Sample id Sample description nTPM
Amygdala
nTPM: 41.3
2514 Male, age 75, right hemisphere 43.9
2814 Male, age 76, right hemisphere 42.1
2695 Female, age 67, right hemisphere 42.0
1987 Female, age 91, left hemisphere 40.7
2517 Female, age 94, left hemisphere 37.8
Basal amygdala
nTPM: 35.6
2609 Male, age 75, right hemisphere 39.7
1955 Male, age 76, both hemispheres 38.7
2110 Male, age 80, left hemisphere 36.6
2243 Female, age 91, right hemisphere 36.1
2685 Female, age 94, left hemisphere 32.8
2827 Female, age 67, right hemisphere 29.6
Central amygdala
nTPM: 36.8
2515 Male, age 75, right hemisphere 39.6
1905 Male, age 76, both hemispheres 39.5
2701 Female, age 91, right hemisphere 35.6
2239 Male, age 80, left hemisphere 34.7
2826 Female, age 94, left hemisphere 34.5
Corticomedial amygdala
nTPM: 37.1
2428 Male, age 75, right hemisphere 42.6
2240 Male, age 76, both hemispheres 40.2
2429 Female, age 94, left hemisphere 37.3
2829 Male, age 80, left hemisphere 37.2
2242 Female, age 91, right hemisphere 36.3
2535 Female, age 67, right hemisphere 28.7
Lateral amygdala
nTPM: 35.5
2516 Male, age 75, right hemisphere 41.5
1883 Male, age 76, both hemispheres 38.7
2256 Male, age 80, left hemisphere 34.2
2830 Female, age 67, right hemisphere 33.7
2255 Female, age 91, right hemisphere 33.4
2534 Female, age 94, left hemisphere 31.7
Stria terminalis, bed nucleus
nTPM: 33.5
2201 Male, age 74, unknown 35.0
2486 Female, age 94, both hemispheres 33.3
1974 Female, age 91, both hemispheres 32.1

AMYGDALA - GTEx RNA-seqi
Average nTPM 45.0
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 45.0
Samples: 152

Max nTPM: 81.0
Min nTPM: 27.3
Std nTPM: 9.0
Median nTPM: 43.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 81.0
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 80.3
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 71.1
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 70.5
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 70.5
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 67.4
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 64.4
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 64.1
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 63.7
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 61.2
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 59.7
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 33.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 33.5
FF:10151-102I7 76 years, female 33.5

AMYGDALA - Pig RNA-seqi
Average nTPM 21.3
Pig sample Sample description nTPM
Amygdala
nTPM: 21.3
Samples: 4

Max nTPM: 24.6
Min nTPM: 16.3
Sample A Female 24.6
Sample B Female 24.6
Sample C Male 16.3
Sample D Male 19.5

AMYGDALA - Mouse RNA-seqi
Average nTPM 53.5
Mouse sample Sample description nTPM
Amygdala
nTPM: 53.5
Samples: 4

Max nTPM: 58.0
Min nTPM: 47.2
Sample A Male 47.2
Sample B Male 58.0
Sample C Female 57.2
Sample D Female 51.6

AMYGDALA - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 0.5
68269634 Antisense, RP_041129_01_H11, Mouse strain C57BL/6J (56 days, male) 0.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.