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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:15.3 nTPM
HPA:15.3 nTPM
GTEx:14.0 nTPM
FANTOM5:26.9 Scaled Tags Per Million
Pig:18.8 nTPM
Mouse:23.4 nTPM
Allen mouse:8.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA015515Antibody CAB004546
Glial cells LowNot detected
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.3
Sample id Sample description nTPM
Hippocampus
nTPM: 13.0
1911 Female, age 85, right hemisphere 14.6
2529 Female, age 94, left hemisphere 13.5
2148 Female, age 91, left hemisphere 12.9
2621 Female, age 67, right hemisphere 12.7
1855 Male, age 76, left hemisphere 12.5
1898 Male, age 80, left hemisphere 12.0
Dentate gyrus
nTPM: 11.8
2531 Female, age 67, both hemispheres 14.5
1927 Female, age 91, both hemispheres 13.2
2246 Female, age 85, both hemispheres 12.7
2010 Male, age 76, both hemispheres 10.7
2530 Female, age 94, left hemisphere 10.3
2528 Male, age 74, both hemispheres 9.5
Entorhinal gyrus
nTPM: 12.8
2613 Female, age 94, left hemisphere 15.0
2686 Male, age 75, right hemisphere 13.2
2764 Male, age 80, right hemisphere 12.6
2117 Female, age 91, right hemisphere 12.4
1787 Male, age 76, left hemisphere 12.3
1938 Female, age 85, left hemisphere 11.5
Hippocampus, CA1
nTPM: 14.6
2749 Male, age 80, left hemisphere 22.4
1873 Female, age 85, both hemispheres 13.1
2082 Female, age 91, right hemisphere 12.9
2527 Male, age 74, both hemispheres 12.5
2045 Male, age 76, both hemispheres 12.1
Hippocampus, CA2
nTPM: 12.2
2113 Female, age 91, right hemisphere 12.9
2437 Female, age 94, left hemisphere 12.8
1892 Male, age 76, both hemispheres 12.7
1963 Male, age 80, left hemisphere 12.5
2249 Male, age 74, both hemispheres 11.2
1940 Female, age 85, left hemisphere 10.9
Hippocampus, CA3
nTPM: 15.3
2137 Male, age 80, left hemisphere 25.9
2620 Female, age 94, left hemisphere 14.7
1867 Male, age 76, both hemispheres 13.5
1891 Female, age 85, both hemispheres 12.8
2436 Male, age 74, both hemispheres 12.8
2861 Female, age 67, both hemispheres 12.0
Parahippocampal cortex
nTPM: 12.6
2245 Female, age 91, both hemispheres 13.8
2622 Female, age 67, right hemisphere 13.7
2532 Female, age 72, left hemisphere 13.3
1850 Male, age 80, both hemispheres 12.6
2692 Male, age 74, both hemispheres 12.5
1933 Female, age 85, both hemispheres 12.3
2250 Female, age 67, right hemisphere 12.2
2693 Female, age 94, both hemispheres 12.2
2018 Male, age 76, both hemispheres 12.1
1990 Female, age 91, right hemisphere 11.2
Perirhinal gyrus
nTPM: 12.9
2848 Male, age 76, right hemisphere 13.8
1841 Female, age 85, right hemisphere 12.9
1794 Male, age 80, right hemisphere 12.8
1847 Female, age 91, left hemisphere 12.7
2521 Female, age 94, right hemisphere 12.4
Subiculum
nTPM: 12.6
1901 Male, age 80, both hemispheres 16.5
2042 Male, age 76, both hemispheres 13.1
1977 Female, age 85, both hemispheres 12.9
2619 Male, age 74, both hemispheres 11.8
2729 Female, age 91, right hemisphere 11.0
2438 Female, age 94, left hemisphere 10.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.0
Samples: 197

Max nTPM: 22.4
Min nTPM: 8.0
Std nTPM: 2.7
Median nTPM: 13.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 22.4
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 21.1
GTEX-1B8L1-0011-R1a-SM-7P8SS 60-69 years, male 20.8
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 20.6
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 20.4
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 20.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 19.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 19.7
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 19.5
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 19.4
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 19.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 26.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 26.9
FF:10169-103B7 60 years, female 30.3
FF:10153-102I9 76 years, female 23.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 18.8
Samples: 4

Max nTPM: 20.3
Min nTPM: 17.1
Sample A Female 17.1
Sample B Female 17.8
Sample C Male 20.3
Sample D Male 20.0
Entorhinal cortex
nTPM: 18.4
Samples: 4

Max nTPM: 19.8
Min nTPM: 16.9
Sample A Female 17.4
Sample B Female 19.8
Sample C Male 16.9
Sample D Male 19.5
Subiculum
nTPM: 18.8
Samples: 4

Max nTPM: 20.4
Min nTPM: 16.9
Sample A Female 16.9
Sample B Female 19.6
Sample C Male 20.4
Sample D Male 18.4
Ventral hippocampus
nTPM: 18.2
Samples: 4

Max nTPM: 19.8
Min nTPM: 16.4
Sample A Female 17.3
Sample B Female 19.8
Sample C Male 16.4
Sample D Male 19.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 23.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 23.4
Samples: 4

Max nTPM: 28.3
Min nTPM: 16.4
Sample A Male 22.9
Sample B Male 28.3
Sample C Female 25.9
Sample D Female 16.4
Hippocampal formation
nTPM: 23.3
Samples: 4

Max nTPM: 26.6
Min nTPM: 18.1
Sample A Male 23.8
Sample B Male 18.1
Sample C Female 24.5
Sample D Female 26.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.6
71610881 Antisense, RP_050927_02_A11, Mouse strain C57BL/6J (56 days, male) 8.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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