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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni
Consensus:24.3 nTPM
HPA:24.3 nTPM
GTEx:78.3 nTPM
FANTOM5:356.1 Scaled Tags Per Million
Pig:61.8 nTPM
Mouse:136.4 nTPM
Allen mouse:17.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA002554
Glial cells Medium
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 24.3
Sample id Sample description nTPM
Hippocampus
nTPM: 22.7
1855 Male, age 76, left hemisphere 23.5
1911 Female, age 85, right hemisphere 23.1
1898 Male, age 80, left hemisphere 22.8
2148 Female, age 91, left hemisphere 22.5
2621 Female, age 67, right hemisphere 22.4
2529 Female, age 94, left hemisphere 21.9
Dentate gyrus
nTPM: 23.4
2528 Male, age 74, both hemispheres 24.7
1927 Female, age 91, both hemispheres 24.0
2531 Female, age 67, both hemispheres 23.2
2530 Female, age 94, left hemisphere 23.0
2010 Male, age 76, both hemispheres 22.7
2246 Female, age 85, both hemispheres 22.5
Entorhinal gyrus
nTPM: 23.0
2764 Male, age 80, right hemisphere 24.6
2613 Female, age 94, left hemisphere 24.1
2686 Male, age 75, right hemisphere 22.6
1938 Female, age 85, left hemisphere 22.5
2117 Female, age 91, right hemisphere 22.1
1787 Male, age 76, left hemisphere 22.0
Hippocampus, CA1
nTPM: 24.3
2082 Female, age 91, right hemisphere 26.4
2749 Male, age 80, left hemisphere 25.4
1873 Female, age 85, both hemispheres 23.6
2045 Male, age 76, both hemispheres 23.5
2527 Male, age 74, both hemispheres 22.7
Hippocampus, CA2
nTPM: 23.3
2249 Male, age 74, both hemispheres 26.7
2113 Female, age 91, right hemisphere 23.3
1963 Male, age 80, left hemisphere 23.0
2437 Female, age 94, left hemisphere 22.9
1892 Male, age 76, both hemispheres 22.4
1940 Female, age 85, left hemisphere 21.5
Hippocampus, CA3
nTPM: 23.9
2620 Female, age 94, left hemisphere 26.9
2137 Male, age 80, left hemisphere 24.7
2436 Male, age 74, both hemispheres 23.7
2861 Female, age 67, both hemispheres 23.5
1867 Male, age 76, both hemispheres 22.5
1891 Female, age 85, both hemispheres 22.3
Parahippocampal cortex
nTPM: 22.8
1933 Female, age 85, both hemispheres 24.0
1850 Male, age 80, both hemispheres 23.6
2250 Female, age 67, right hemisphere 23.1
2693 Female, age 94, both hemispheres 23.1
2622 Female, age 67, right hemisphere 22.7
2532 Female, age 72, left hemisphere 22.5
2692 Male, age 74, both hemispheres 22.5
1990 Female, age 91, right hemisphere 22.4
2018 Male, age 76, both hemispheres 22.0
2245 Female, age 91, both hemispheres 22.0
Perirhinal gyrus
nTPM: 23.5
1841 Female, age 85, right hemisphere 24.0
1847 Female, age 91, left hemisphere 24.0
2521 Female, age 94, right hemisphere 23.8
2848 Male, age 76, right hemisphere 23.3
1794 Male, age 80, right hemisphere 22.5
Subiculum
nTPM: 23.0
2729 Female, age 91, right hemisphere 25.2
1977 Female, age 85, both hemispheres 23.6
2438 Female, age 94, left hemisphere 23.3
2619 Male, age 74, both hemispheres 22.8
2042 Male, age 76, both hemispheres 21.7
1901 Male, age 80, both hemispheres 21.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 78.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 78.3
Samples: 197

Max nTPM: 145.6
Min nTPM: 33.3
Std nTPM: 27.3
Median nTPM: 71.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 145.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 144.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 142.3
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 141.2
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 139.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 138.4
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 136.8
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 135.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 135.1
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 135.1
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 132.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 356.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 356.1
FF:10169-103B7 60 years, female 486.5
FF:10153-102I9 76 years, female 225.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 61.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 61.8
Samples: 4

Max nTPM: 71.0
Min nTPM: 53.3
Sample A Female 71.0
Sample B Female 69.2
Sample C Male 53.7
Sample D Male 53.3
Entorhinal cortex
nTPM: 54.1
Samples: 4

Max nTPM: 57.2
Min nTPM: 49.9
Sample A Female 54.4
Sample B Female 57.2
Sample C Male 54.7
Sample D Male 49.9
Subiculum
nTPM: 54.8
Samples: 4

Max nTPM: 66.2
Min nTPM: 45.5
Sample A Female 66.2
Sample B Female 51.9
Sample C Male 55.6
Sample D Male 45.5
Ventral hippocampus
nTPM: 59.5
Samples: 4

Max nTPM: 67.0
Min nTPM: 45.3
Sample A Female 61.1
Sample B Female 45.3
Sample C Male 67.0
Sample D Male 64.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 136.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 129.5
Samples: 4

Max nTPM: 133.7
Min nTPM: 124.9
Sample A Male 127.7
Sample B Male 124.9
Sample C Female 133.7
Sample D Female 131.6
Hippocampal formation
nTPM: 136.4
Samples: 4

Max nTPM: 141.5
Min nTPM: 126.8
Sample A Male 140.8
Sample B Male 136.3
Sample C Female 141.5
Sample D Female 126.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.0
69014542 Antisense, RP_050310_01_C10, Mouse strain C57BL/6J (56 days, male) 17.0

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