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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:173.7 nTPM
HPA:173.7 nTPM
GTEx:341.6 nTPM
FANTOM5:386.6 Scaled Tags Per Million
Pig:311.9 nTPM
Mouse:308.4 nTPM
Allen mouse:5.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001527Antibody HPA005692Antibody CAB009538
Glial cells LowNot detectedNot detected
Neuronal cells LowNot detectedNot detected






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 173.7
Sample id Sample description nTPM
Hippocampus
nTPM: 135.2
1911 Female, age 85, right hemisphere 185.2
1898 Male, age 80, left hemisphere 144.2
2621 Female, age 67, right hemisphere 129.8
2529 Female, age 94, left hemisphere 128.0
2148 Female, age 91, left hemisphere 116.0
1855 Male, age 76, left hemisphere 108.2
Dentate gyrus
nTPM: 154.7
2530 Female, age 94, left hemisphere 263.8
2528 Male, age 74, both hemispheres 187.3
2010 Male, age 76, both hemispheres 148.4
2246 Female, age 85, both hemispheres 126.1
2531 Female, age 67, both hemispheres 109.0
1927 Female, age 91, both hemispheres 93.7
Entorhinal gyrus
nTPM: 134.3
2117 Female, age 91, right hemisphere 197.4
2764 Male, age 80, right hemisphere 164.7
1938 Female, age 85, left hemisphere 128.5
1787 Male, age 76, left hemisphere 106.8
2613 Female, age 94, left hemisphere 106.1
2686 Male, age 75, right hemisphere 102.4
Hippocampus, CA1
nTPM: 121.7
1873 Female, age 85, both hemispheres 152.4
2527 Male, age 74, both hemispheres 149.2
2082 Female, age 91, right hemisphere 130.1
2749 Male, age 80, left hemisphere 118.0
2045 Male, age 76, both hemispheres 58.9
Hippocampus, CA2
nTPM: 162.0
2249 Male, age 74, both hemispheres 243.6
1963 Male, age 80, left hemisphere 206.9
1940 Female, age 85, left hemisphere 147.9
2437 Female, age 94, left hemisphere 144.6
2113 Female, age 91, right hemisphere 132.7
1892 Male, age 76, both hemispheres 96.6
Hippocampus, CA3
nTPM: 109.6
1891 Female, age 85, both hemispheres 207.6
1867 Male, age 76, both hemispheres 125.6
2436 Male, age 74, both hemispheres 122.2
2137 Male, age 80, left hemisphere 78.2
2620 Female, age 94, left hemisphere 67.6
2861 Female, age 67, both hemispheres 56.1
Parahippocampal cortex
nTPM: 106.7
2532 Female, age 72, left hemisphere 144.0
1990 Female, age 91, right hemisphere 133.8
2692 Male, age 74, both hemispheres 124.3
1850 Male, age 80, both hemispheres 113.9
2018 Male, age 76, both hemispheres 108.5
1933 Female, age 85, both hemispheres 108.1
2250 Female, age 67, right hemisphere 96.7
2245 Female, age 91, both hemispheres 96.4
2693 Female, age 94, both hemispheres 87.5
2622 Female, age 67, right hemisphere 53.9
Perirhinal gyrus
nTPM: 80.5
2521 Female, age 94, right hemisphere 90.6
2848 Male, age 76, right hemisphere 85.2
1847 Female, age 91, left hemisphere 79.3
1794 Male, age 80, right hemisphere 78.4
1841 Female, age 85, right hemisphere 68.9
Subiculum
nTPM: 173.7
2042 Male, age 76, both hemispheres 248.5
1901 Male, age 80, both hemispheres 214.8
1977 Female, age 85, both hemispheres 189.9
2729 Female, age 91, right hemisphere 133.2
2619 Male, age 74, both hemispheres 128.1
2438 Female, age 94, left hemisphere 127.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 341.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 341.6
Samples: 197

Max nTPM: 1361.4
Min nTPM: 17.5
Std nTPM: 249.6
Median nTPM: 274.7
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 1361.4
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 1115.6
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 1081.6
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 1067.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 1058.7
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 1022.3
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 950.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 912.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 895.1
GTEX-11GSO-0011-R1b-SM-57WD3 60-69 years, male 882.8
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 867.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 386.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 386.6
FF:10153-102I9 76 years, female 421.6
FF:10169-103B7 60 years, female 351.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 311.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 311.9
Samples: 4

Max nTPM: 508.6
Min nTPM: 71.2
Sample A Female 508.6
Sample B Female 213.3
Sample C Male 454.5
Sample D Male 71.2
Entorhinal cortex
nTPM: 72.5
Samples: 4

Max nTPM: 128.8
Min nTPM: 42.5
Sample A Female 54.0
Sample B Female 128.8
Sample C Male 42.5
Sample D Male 64.7
Subiculum
nTPM: 85.2
Samples: 4

Max nTPM: 113.8
Min nTPM: 58.8
Sample A Female 92.5
Sample B Female 113.8
Sample C Male 58.8
Sample D Male 75.8
Ventral hippocampus
nTPM: 172.3
Samples: 4

Max nTPM: 252.0
Min nTPM: 71.0
Sample A Female 218.5
Sample B Female 71.0
Sample C Male 147.6
Sample D Male 252.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 308.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 154.5
Samples: 4

Max nTPM: 218.0
Min nTPM: 88.9
Sample A Male 218.0
Sample B Male 142.8
Sample C Female 168.4
Sample D Female 88.9
Hippocampal formation
nTPM: 308.4
Samples: 4

Max nTPM: 444.7
Min nTPM: 217.4
Sample A Male 217.4
Sample B Male 253.0
Sample C Female 444.7
Sample D Female 318.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.3
68795444 Antisense, RP_041130_01_F08, Mouse strain C57BL/6J (56 days, male) 5.3

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