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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:56.4 nTPM
HPA:56.4 nTPM
GTEx:58.9 nTPM
FANTOM5:95.9 Scaled Tags Per Million
Mouse:73.9 nTPM
Allen mouse:10.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA024032
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 56.4
Sample id Sample description nTPM
Hippocampus
nTPM: 54.6
1898 Male, age 80, left hemisphere 58.1
1855 Male, age 76, left hemisphere 55.5
2621 Female, age 67, right hemisphere 55.0
2529 Female, age 94, left hemisphere 53.9
2148 Female, age 91, left hemisphere 52.7
1911 Female, age 85, right hemisphere 52.6
Dentate gyrus
nTPM: 53.8
2530 Female, age 94, left hemisphere 55.7
2010 Male, age 76, both hemispheres 55.2
2246 Female, age 85, both hemispheres 54.1
1927 Female, age 91, both hemispheres 53.9
2531 Female, age 67, both hemispheres 52.5
2528 Male, age 74, both hemispheres 51.7
Entorhinal gyrus
nTPM: 54.6
2764 Male, age 80, right hemisphere 56.5
1938 Female, age 85, left hemisphere 56.0
1787 Male, age 76, left hemisphere 54.9
2686 Male, age 75, right hemisphere 53.9
2117 Female, age 91, right hemisphere 53.6
2613 Female, age 94, left hemisphere 52.6
Hippocampus, CA1
nTPM: 56.4
2749 Male, age 80, left hemisphere 64.5
2527 Male, age 74, both hemispheres 56.1
1873 Female, age 85, both hemispheres 55.2
2045 Male, age 76, both hemispheres 53.5
2082 Female, age 91, right hemisphere 52.6
Hippocampus, CA2
nTPM: 54.8
1892 Male, age 76, both hemispheres 57.6
1963 Male, age 80, left hemisphere 56.9
2249 Male, age 74, both hemispheres 55.4
1940 Female, age 85, left hemisphere 53.6
2437 Female, age 94, left hemisphere 53.3
2113 Female, age 91, right hemisphere 52.2
Hippocampus, CA3
nTPM: 54.8
2137 Male, age 80, left hemisphere 57.9
1867 Male, age 76, both hemispheres 56.8
2436 Male, age 74, both hemispheres 55.9
2620 Female, age 94, left hemisphere 53.5
1891 Female, age 85, both hemispheres 53.1
2861 Female, age 67, both hemispheres 51.3
Parahippocampal cortex
nTPM: 54.3
1850 Male, age 80, both hemispheres 56.9
1933 Female, age 85, both hemispheres 56.3
2245 Female, age 91, both hemispheres 55.7
2250 Female, age 67, right hemisphere 55.0
1990 Female, age 91, right hemisphere 54.6
2532 Female, age 72, left hemisphere 54.0
2692 Male, age 74, both hemispheres 53.9
2622 Female, age 67, right hemisphere 53.1
2018 Male, age 76, both hemispheres 52.4
2693 Female, age 94, both hemispheres 51.5
Perirhinal gyrus
nTPM: 56.0
1847 Female, age 91, left hemisphere 57.7
1794 Male, age 80, right hemisphere 57.6
1841 Female, age 85, right hemisphere 56.1
2521 Female, age 94, right hemisphere 55.0
2848 Male, age 76, right hemisphere 53.5
Subiculum
nTPM: 53.9
1901 Male, age 80, both hemispheres 56.8
1977 Female, age 85, both hemispheres 54.4
2042 Male, age 76, both hemispheres 54.3
2619 Male, age 74, both hemispheres 53.6
2438 Female, age 94, left hemisphere 53.0
2729 Female, age 91, right hemisphere 51.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 58.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 58.9
Samples: 197

Max nTPM: 138.8
Min nTPM: 24.3
Std nTPM: 16.3
Median nTPM: 57.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 138.8
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 108.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 106.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 106.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 103.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 100.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 96.1
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 89.3
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 88.6
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 87.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 85.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 95.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 95.9
FF:10169-103B7 60 years, female 118.2
FF:10153-102I9 76 years, female 73.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 73.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 73.9
Samples: 4

Max nTPM: 79.5
Min nTPM: 69.4
Sample A Male 74.8
Sample B Male 72.0
Sample C Female 69.4
Sample D Female 79.5
Hippocampal formation
nTPM: 71.0
Samples: 4

Max nTPM: 80.6
Min nTPM: 65.4
Sample A Male 80.6
Sample B Male 71.4
Sample C Female 66.4
Sample D Female 65.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.7
69014949 Antisense, RP_050310_02_A09, Mouse strain C57BL/6J (56 days, male) 10.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.