ABOUTMENU
HELP
NEWS
CD200
AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:27.7 nTPM
HPA:27.7 nTPM
GTEx:27.2 nTPM
FANTOM5:65.5 Scaled Tags Per Million
Pig:49.4 nTPM
Mouse:123.3 nTPM
Allen mouse:16.5 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 27.7
Sample id Sample description nTPM
Amygdala
nTPM: 11.8
1987 Female, age 91, left hemisphere 15.5
2814 Male, age 76, right hemisphere 14.0
2517 Female, age 94, left hemisphere 11.9
2514 Male, age 75, right hemisphere 10.7
2695 Female, age 67, right hemisphere 6.8
Basal amygdala
nTPM: 11.4
2243 Female, age 91, right hemisphere 16.3
2685 Female, age 94, left hemisphere 13.3
1955 Male, age 76, both hemispheres 13.2
2110 Male, age 80, left hemisphere 11.3
2609 Male, age 75, right hemisphere 8.4
2827 Female, age 67, right hemisphere 5.7
Central amygdala
nTPM: 13.8
2239 Male, age 80, left hemisphere 17.2
2701 Female, age 91, right hemisphere 16.7
1905 Male, age 76, both hemispheres 13.1
2515 Male, age 75, right hemisphere 11.3
2826 Female, age 94, left hemisphere 10.8
Corticomedial amygdala
nTPM: 14.5
2242 Female, age 91, right hemisphere 19.1
2829 Male, age 80, left hemisphere 18.3
2240 Male, age 76, both hemispheres 16.9
2429 Female, age 94, left hemisphere 15.6
2535 Female, age 67, right hemisphere 8.6
2428 Male, age 75, right hemisphere 8.3
Lateral amygdala
nTPM: 11.7
2255 Female, age 91, right hemisphere 15.4
2534 Female, age 94, left hemisphere 13.7
1883 Male, age 76, both hemispheres 13.6
2516 Male, age 75, right hemisphere 10.5
2256 Male, age 80, left hemisphere 9.5
2830 Female, age 67, right hemisphere 7.5
Stria terminalis, bed nucleus
nTPM: 27.7
2201 Male, age 74, unknown 29.2
1974 Female, age 91, both hemispheres 28.5
2486 Female, age 94, both hemispheres 25.3

AMYGDALA - GTEx RNA-seqi
Average nTPM 27.2
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 27.2
Samples: 152

Max nTPM: 59.0
Min nTPM: 6.0
Std nTPM: 11.8
Median nTPM: 26.2
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 59.0
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 58.5
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 56.6
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 55.6
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 50.2
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 50.0
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 49.4
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 48.1
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 48.0
GTEX-UTHO-0011-R4A-SM-3GIJP 60-69 years, male 47.9
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 46.4
Show allShow less

AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 65.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 65.5
FF:10151-102I7 76 years, female 65.5

AMYGDALA - Pig RNA-seqi
Average nTPM 49.4
Pig sample Sample description nTPM
Amygdala
nTPM: 49.5
Samples: 4

Max nTPM: 56.7
Min nTPM: 40.8
Sample A Female 56.7
Sample B Female 49.5
Sample C Male 40.8
Sample D Male 50.8

AMYGDALA - Mouse RNA-seqi
Average nTPM 123.3
Mouse sample Sample description nTPM
Amygdala
nTPM: 123.3
Samples: 4

Max nTPM: 139.8
Min nTPM: 101.2
Sample A Male 139.8
Sample B Male 123.9
Sample C Female 101.2
Sample D Female 128.1

AMYGDALA - Allen Mouse ISHi
Max Expression energy 16.5
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 16.5
71358579 Antisense, RP_050725_03_E08, Mouse strain C57BL/6J (56 days, male) 18.9
68798962 Antisense, RP_050217_01_F09, Mouse strain C57BL/6J (56 days, male) 14.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.