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CD200
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Low
RNA expressioni
Consensus:27.9 nTPM
HPA:27.9 nTPM
GTEx:26.0 nTPM
FANTOM5:73.3 Scaled Tags Per Million
Pig:53.9 nTPM
Mouse:120.7 nTPM
Allen mouse:13.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA031149
Glial cells High
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 27.9
Sample id Sample description nTPM
Hippocampus
nTPM: 9.0
1898 Male, age 80, left hemisphere 12.9
1911 Female, age 85, right hemisphere 9.5
2621 Female, age 67, right hemisphere 9.2
1855 Male, age 76, left hemisphere 8.1
2529 Female, age 94, left hemisphere 7.3
2148 Female, age 91, left hemisphere 7.0
Dentate gyrus
nTPM: 11.2
1927 Female, age 91, both hemispheres 15.6
2246 Female, age 85, both hemispheres 12.4
2531 Female, age 67, both hemispheres 12.2
2528 Male, age 74, both hemispheres 10.6
2010 Male, age 76, both hemispheres 8.9
2530 Female, age 94, left hemisphere 7.7
Entorhinal gyrus
nTPM: 17.2
2613 Female, age 94, left hemisphere 23.7
1938 Female, age 85, left hemisphere 20.7
2764 Male, age 80, right hemisphere 19.9
1787 Male, age 76, left hemisphere 18.3
2117 Female, age 91, right hemisphere 10.4
2686 Male, age 75, right hemisphere 10.1
Hippocampus, CA1
nTPM: 12.8
2749 Male, age 80, left hemisphere 17.2
2045 Male, age 76, both hemispheres 14.4
2527 Male, age 74, both hemispheres 11.3
2082 Female, age 91, right hemisphere 10.9
1873 Female, age 85, both hemispheres 10.0
Hippocampus, CA2
nTPM: 11.5
1892 Male, age 76, both hemispheres 14.9
1940 Female, age 85, left hemisphere 12.1
2437 Female, age 94, left hemisphere 11.8
2249 Male, age 74, both hemispheres 11.7
2113 Female, age 91, right hemisphere 10.4
1963 Male, age 80, left hemisphere 8.3
Hippocampus, CA3
nTPM: 13.0
2137 Male, age 80, left hemisphere 16.6
2620 Female, age 94, left hemisphere 16.0
1867 Male, age 76, both hemispheres 14.0
1891 Female, age 85, both hemispheres 12.3
2436 Male, age 74, both hemispheres 11.5
2861 Female, age 67, both hemispheres 7.5
Parahippocampal cortex
nTPM: 18.3
1850 Male, age 80, both hemispheres 26.4
2693 Female, age 94, both hemispheres 22.7
1990 Female, age 91, right hemisphere 21.9
1933 Female, age 85, both hemispheres 19.8
2532 Female, age 72, left hemisphere 18.8
2250 Female, age 67, right hemisphere 18.6
2245 Female, age 91, both hemispheres 18.2
2018 Male, age 76, both hemispheres 13.8
2622 Female, age 67, right hemisphere 12.5
2692 Male, age 74, both hemispheres 10.0
Perirhinal gyrus
nTPM: 27.9
1847 Female, age 91, left hemisphere 33.2
1841 Female, age 85, right hemisphere 30.4
1794 Male, age 80, right hemisphere 28.7
2521 Female, age 94, right hemisphere 23.5
2848 Male, age 76, right hemisphere 23.5
Subiculum
nTPM: 12.5
1977 Female, age 85, both hemispheres 18.7
1901 Male, age 80, both hemispheres 14.5
2619 Male, age 74, both hemispheres 14.1
2438 Female, age 94, left hemisphere 12.2
2042 Male, age 76, both hemispheres 8.3
2729 Female, age 91, right hemisphere 7.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 26.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 26.0
Samples: 197

Max nTPM: 71.5
Min nTPM: 4.6
Std nTPM: 12.8
Median nTPM: 22.9
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 71.5
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 67.4
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 66.8
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 62.9
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 56.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 55.1
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 53.9
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 51.8
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 51.4
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 50.0
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 49.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 73.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 73.3
FF:10169-103B7 60 years, female 104.6
FF:10153-102I9 76 years, female 42.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 53.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 45.0
Samples: 4

Max nTPM: 47.8
Min nTPM: 41.9
Sample A Female 41.9
Sample B Female 45.8
Sample C Male 44.6
Sample D Male 47.8
Entorhinal cortex
nTPM: 53.9
Samples: 4

Max nTPM: 54.7
Min nTPM: 52.8
Sample A Female 52.8
Sample B Female 53.8
Sample C Male 54.7
Sample D Male 54.1
Subiculum
nTPM: 50.3
Samples: 4

Max nTPM: 54.4
Min nTPM: 46.5
Sample A Female 54.4
Sample B Female 48.9
Sample C Male 46.5
Sample D Male 51.4
Ventral hippocampus
nTPM: 46.4
Samples: 4

Max nTPM: 51.2
Min nTPM: 38.5
Sample A Female 49.9
Sample B Female 46.0
Sample C Male 51.2
Sample D Male 38.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 120.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 120.7
Samples: 4

Max nTPM: 142.4
Min nTPM: 98.6
Sample A Male 98.6
Sample B Male 116.6
Sample C Female 125.1
Sample D Female 142.4
Hippocampal formation
nTPM: 86.2
Samples: 4

Max nTPM: 108.3
Min nTPM: 74.5
Sample A Male 108.3
Sample B Male 78.4
Sample C Female 74.5
Sample D Female 83.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.6
71358579 Antisense, RP_050725_03_E08, Mouse strain C57BL/6J (56 days, male) 15.3
68798962 Antisense, RP_050217_01_F09, Mouse strain C57BL/6J (56 days, male) 12.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.