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JPH4
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:115.4 nTPM
HPA:115.4 nTPM
GTEx:149.4 nTPM
FANTOM5:289.8 Scaled Tags Per Million
Pig:119.1 nTPM
Mouse:123.2 nTPM
Allen mouse:17.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 115.4
Sample id Sample description nTPM
Hippocampus
nTPM: 93.6
2621 Female, age 67, right hemisphere 138.0
2148 Female, age 91, left hemisphere 125.9
2529 Female, age 94, left hemisphere 97.9
1911 Female, age 85, right hemisphere 95.1
1898 Male, age 80, left hemisphere 59.1
1855 Male, age 76, left hemisphere 45.4
Dentate gyrus
nTPM: 94.8
2531 Female, age 67, both hemispheres 178.2
1927 Female, age 91, both hemispheres 116.6
2528 Male, age 74, both hemispheres 96.7
2530 Female, age 94, left hemisphere 72.0
2246 Female, age 85, both hemispheres 66.8
2010 Male, age 76, both hemispheres 38.5
Entorhinal gyrus
nTPM: 91.5
2613 Female, age 94, left hemisphere 160.1
2686 Male, age 75, right hemisphere 111.1
2764 Male, age 80, right hemisphere 79.7
1938 Female, age 85, left hemisphere 79.0
1787 Male, age 76, left hemisphere 61.4
2117 Female, age 91, right hemisphere 57.9
Hippocampus, CA1
nTPM: 104.4
2749 Male, age 80, left hemisphere 159.6
2527 Male, age 74, both hemispheres 132.1
2082 Female, age 91, right hemisphere 96.9
1873 Female, age 85, both hemispheres 69.8
2045 Male, age 76, both hemispheres 63.6
Hippocampus, CA2
nTPM: 72.4
2113 Female, age 91, right hemisphere 110.6
2249 Male, age 74, both hemispheres 92.2
1963 Male, age 80, left hemisphere 83.8
2437 Female, age 94, left hemisphere 69.5
1892 Male, age 76, both hemispheres 44.1
1940 Female, age 85, left hemisphere 34.5
Hippocampus, CA3
nTPM: 115.4
2620 Female, age 94, left hemisphere 190.2
2861 Female, age 67, both hemispheres 169.3
2137 Male, age 80, left hemisphere 167.3
2436 Male, age 74, both hemispheres 73.0
1867 Male, age 76, both hemispheres 47.1
1891 Female, age 85, both hemispheres 45.8
Parahippocampal cortex
nTPM: 79.1
2245 Female, age 91, both hemispheres 153.6
2622 Female, age 67, right hemisphere 111.0
2693 Female, age 94, both hemispheres 94.9
2250 Female, age 67, right hemisphere 83.4
1933 Female, age 85, both hemispheres 72.0
1990 Female, age 91, right hemisphere 61.8
2532 Female, age 72, left hemisphere 61.1
2692 Male, age 74, both hemispheres 56.7
1850 Male, age 80, both hemispheres 49.4
2018 Male, age 76, both hemispheres 47.6
Perirhinal gyrus
nTPM: 81.0
2521 Female, age 94, right hemisphere 97.8
1847 Female, age 91, left hemisphere 91.1
1794 Male, age 80, right hemisphere 74.1
2848 Male, age 76, right hemisphere 72.3
1841 Female, age 85, right hemisphere 69.8
Subiculum
nTPM: 53.0
2729 Female, age 91, right hemisphere 90.1
2619 Male, age 74, both hemispheres 55.2
1901 Male, age 80, both hemispheres 53.9
1977 Female, age 85, both hemispheres 51.6
2042 Male, age 76, both hemispheres 38.9
2438 Female, age 94, left hemisphere 28.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 149.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 149.4
Samples: 197

Max nTPM: 495.1
Min nTPM: 7.8
Std nTPM: 87.8
Median nTPM: 143.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 495.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 397.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 378.3
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 366.7
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 357.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 351.7
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 331.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 328.5
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 327.1
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 308.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 297.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 289.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 289.8
FF:10169-103B7 60 years, female 290.8
FF:10153-102I9 76 years, female 288.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 119.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 119.1
Samples: 4

Max nTPM: 141.4
Min nTPM: 78.4
Sample A Female 140.6
Sample B Female 141.4
Sample C Male 78.4
Sample D Male 116.0
Entorhinal cortex
nTPM: 109.4
Samples: 4

Max nTPM: 134.0
Min nTPM: 85.3
Sample A Female 122.2
Sample B Female 85.3
Sample C Male 134.0
Sample D Male 96.2
Subiculum
nTPM: 92.9
Samples: 4

Max nTPM: 117.7
Min nTPM: 75.3
Sample A Female 117.7
Sample B Female 84.2
Sample C Male 94.3
Sample D Male 75.3
Ventral hippocampus
nTPM: 118.1
Samples: 4

Max nTPM: 150.5
Min nTPM: 89.3
Sample A Female 89.3
Sample B Female 95.0
Sample C Male 137.7
Sample D Male 150.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 123.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 109.6
Samples: 4

Max nTPM: 124.1
Min nTPM: 97.0
Sample A Male 105.2
Sample B Male 97.0
Sample C Female 111.9
Sample D Female 124.1
Hippocampal formation
nTPM: 123.3
Samples: 4

Max nTPM: 131.0
Min nTPM: 118.6
Sample A Male 124.3
Sample B Male 131.0
Sample C Female 118.6
Sample D Female 119.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.5
75831724 Antisense, RP_060601_02_A09, Mouse strain C57BL/6J (56 days, male) 17.5

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The Human Protein Atlas

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