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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:38.8 nTPM
HPA:38.8 nTPM
GTEx:35.1 nTPM
FANTOM5:75.6 Scaled Tags Per Million
Pig:18.9 nTPM
Mouse:15.6 nTPM
Allen mouse:3.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035956
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 38.8
Sample id Sample description nTPM
Hippocampus
nTPM: 36.1
2529 Female, age 94, left hemisphere 41.0
2621 Female, age 67, right hemisphere 36.6
1898 Male, age 80, left hemisphere 36.0
1855 Male, age 76, left hemisphere 35.1
2148 Female, age 91, left hemisphere 34.1
1911 Female, age 85, right hemisphere 33.6
Dentate gyrus
nTPM: 35.1
2530 Female, age 94, left hemisphere 37.8
2531 Female, age 67, both hemispheres 37.8
2246 Female, age 85, both hemispheres 35.3
2010 Male, age 76, both hemispheres 34.9
1927 Female, age 91, both hemispheres 32.5
2528 Male, age 74, both hemispheres 32.2
Entorhinal gyrus
nTPM: 37.1
2686 Male, age 75, right hemisphere 40.1
2117 Female, age 91, right hemisphere 39.5
2764 Male, age 80, right hemisphere 37.0
1787 Male, age 76, left hemisphere 36.9
2613 Female, age 94, left hemisphere 36.5
1938 Female, age 85, left hemisphere 32.8
Hippocampus, CA1
nTPM: 34.8
2045 Male, age 76, both hemispheres 36.9
2527 Male, age 74, both hemispheres 35.1
2082 Female, age 91, right hemisphere 35.0
2749 Male, age 80, left hemisphere 34.8
1873 Female, age 85, both hemispheres 32.2
Hippocampus, CA2
nTPM: 35.0
1892 Male, age 76, both hemispheres 37.5
2437 Female, age 94, left hemisphere 36.3
1963 Male, age 80, left hemisphere 34.5
2113 Female, age 91, right hemisphere 34.1
1940 Female, age 85, left hemisphere 33.9
2249 Male, age 74, both hemispheres 33.6
Hippocampus, CA3
nTPM: 35.3
1867 Male, age 76, both hemispheres 39.0
1891 Female, age 85, both hemispheres 38.4
2137 Male, age 80, left hemisphere 36.3
2620 Female, age 94, left hemisphere 34.5
2861 Female, age 67, both hemispheres 32.6
2436 Male, age 74, both hemispheres 31.2
Parahippocampal cortex
nTPM: 38.1
2532 Female, age 72, left hemisphere 44.9
2692 Male, age 74, both hemispheres 40.7
2622 Female, age 67, right hemisphere 40.5
2693 Female, age 94, both hemispheres 39.4
2245 Female, age 91, both hemispheres 37.4
2018 Male, age 76, both hemispheres 37.3
1850 Male, age 80, both hemispheres 36.8
1933 Female, age 85, both hemispheres 35.9
1990 Female, age 91, right hemisphere 35.2
2250 Female, age 67, right hemisphere 33.1
Perirhinal gyrus
nTPM: 38.0
2848 Male, age 76, right hemisphere 41.4
2521 Female, age 94, right hemisphere 38.5
1794 Male, age 80, right hemisphere 38.1
1841 Female, age 85, right hemisphere 37.2
1847 Female, age 91, left hemisphere 34.5
Subiculum
nTPM: 38.8
2438 Female, age 94, left hemisphere 43.3
1901 Male, age 80, both hemispheres 41.5
2042 Male, age 76, both hemispheres 40.7
1977 Female, age 85, both hemispheres 37.9
2619 Male, age 74, both hemispheres 37.8
2729 Female, age 91, right hemisphere 31.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 35.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 35.1
Samples: 197

Max nTPM: 74.3
Min nTPM: 20.0
Std nTPM: 8.9
Median nTPM: 33.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 74.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 72.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 69.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 59.7
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 58.3
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 56.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 55.5
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 55.2
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 53.8
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 52.0
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 51.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 75.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 75.6
FF:10153-102I9 76 years, female 75.9
FF:10169-103B7 60 years, female 75.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 18.9
Samples: 4

Max nTPM: 20.9
Min nTPM: 15.5
Sample A Female 20.9
Sample B Female 18.3
Sample C Male 20.9
Sample D Male 15.5
Entorhinal cortex
nTPM: 12.3
Samples: 4

Max nTPM: 13.8
Min nTPM: 10.8
Sample A Female 12.7
Sample B Female 13.8
Sample C Male 10.8
Sample D Male 12.0
Subiculum
nTPM: 13.8
Samples: 4

Max nTPM: 14.6
Min nTPM: 13.1
Sample A Female 14.5
Sample B Female 14.6
Sample C Male 13.1
Sample D Male 13.1
Ventral hippocampus
nTPM: 15.2
Samples: 4

Max nTPM: 19.7
Min nTPM: 12.7
Sample A Female 14.7
Sample B Female 12.7
Sample C Male 13.5
Sample D Male 19.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 15.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.6
Samples: 4

Max nTPM: 17.2
Min nTPM: 14.4
Sample A Male 15.7
Sample B Male 17.2
Sample C Female 14.4
Sample D Female 15.2
Hippocampal formation
nTPM: 14.7
Samples: 4

Max nTPM: 14.9
Min nTPM: 14.1
Sample A Male 14.9
Sample B Male 14.8
Sample C Female 14.8
Sample D Female 14.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.2
68666732 Antisense, RP_050126_02_G12, Mouse strain C57BL/6J (56 days, male) 3.2

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The Human Protein Atlas

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