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GGA1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:35.3 nTPM
HPA:35.3 nTPM
GTEx:33.0 nTPM
FANTOM5:25.7 Scaled Tags Per Million
Pig:16.6 nTPM
Mouse:9.9 nTPM
Allen mouse:20.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA048280Antibody HPA051016
Glial cells Not detectedNot detected
Neuronal cells LowLow




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 35.3
Sample id Sample description nTPM
Hippocampus
nTPM: 34.5
2529 Female, age 94, left hemisphere 36.3
2621 Female, age 67, right hemisphere 34.6
1911 Female, age 85, right hemisphere 34.4
2148 Female, age 91, left hemisphere 34.4
1855 Male, age 76, left hemisphere 33.7
1898 Male, age 80, left hemisphere 33.3
Dentate gyrus
nTPM: 33.8
2530 Female, age 94, left hemisphere 38.4
2246 Female, age 85, both hemispheres 33.8
2010 Male, age 76, both hemispheres 33.6
2528 Male, age 74, both hemispheres 32.6
2531 Female, age 67, both hemispheres 32.4
1927 Female, age 91, both hemispheres 32.0
Entorhinal gyrus
nTPM: 35.3
2613 Female, age 94, left hemisphere 36.9
2686 Male, age 75, right hemisphere 36.3
2764 Male, age 80, right hemisphere 36.2
1787 Male, age 76, left hemisphere 35.7
2117 Female, age 91, right hemisphere 34.0
1938 Female, age 85, left hemisphere 32.9
Hippocampus, CA1
nTPM: 33.7
2082 Female, age 91, right hemisphere 36.1
1873 Female, age 85, both hemispheres 34.4
2749 Male, age 80, left hemisphere 33.1
2045 Male, age 76, both hemispheres 32.7
2527 Male, age 74, both hemispheres 32.0
Hippocampus, CA2
nTPM: 34.9
2437 Female, age 94, left hemisphere 38.5
1940 Female, age 85, left hemisphere 37.2
1963 Male, age 80, left hemisphere 34.2
1892 Male, age 76, both hemispheres 33.8
2113 Female, age 91, right hemisphere 33.3
2249 Male, age 74, both hemispheres 32.5
Hippocampus, CA3
nTPM: 34.6
1867 Male, age 76, both hemispheres 36.2
2620 Female, age 94, left hemisphere 35.5
1891 Female, age 85, both hemispheres 34.8
2861 Female, age 67, both hemispheres 33.8
2137 Male, age 80, left hemisphere 33.7
2436 Male, age 74, both hemispheres 33.7
Parahippocampal cortex
nTPM: 33.5
2692 Male, age 74, both hemispheres 35.6
1990 Female, age 91, right hemisphere 35.1
2018 Male, age 76, both hemispheres 34.8
2622 Female, age 67, right hemisphere 34.7
2532 Female, age 72, left hemisphere 33.7
1850 Male, age 80, both hemispheres 33.5
1933 Female, age 85, both hemispheres 32.2
2250 Female, age 67, right hemisphere 32.2
2245 Female, age 91, both hemispheres 31.8
2693 Female, age 94, both hemispheres 31.3
Perirhinal gyrus
nTPM: 32.3
1794 Male, age 80, right hemisphere 34.0
1847 Female, age 91, left hemisphere 32.7
2521 Female, age 94, right hemisphere 32.6
2848 Male, age 76, right hemisphere 31.8
1841 Female, age 85, right hemisphere 30.6
Subiculum
nTPM: 34.9
2042 Male, age 76, both hemispheres 37.8
2619 Male, age 74, both hemispheres 35.4
2438 Female, age 94, left hemisphere 35.0
1901 Male, age 80, both hemispheres 34.7
2729 Female, age 91, right hemisphere 34.4
1977 Female, age 85, both hemispheres 32.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 33.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 33.0
Samples: 197

Max nTPM: 63.2
Min nTPM: 18.1
Std nTPM: 5.9
Median nTPM: 32.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 63.2
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 54.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 51.0
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 47.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 44.4
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 44.3
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 43.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 43.3
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 43.0
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 42.9
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 42.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 25.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 25.7
FF:10153-102I9 76 years, female 32.6
FF:10169-103B7 60 years, female 18.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 15.0
Samples: 4

Max nTPM: 17.7
Min nTPM: 12.3
Sample A Female 17.7
Sample B Female 15.5
Sample C Male 14.5
Sample D Male 12.3
Entorhinal cortex
nTPM: 15.8
Samples: 4

Max nTPM: 16.6
Min nTPM: 14.2
Sample A Female 16.0
Sample B Female 16.6
Sample C Male 16.3
Sample D Male 14.2
Subiculum
nTPM: 15.8
Samples: 4

Max nTPM: 19.4
Min nTPM: 14.4
Sample A Female 19.4
Sample B Female 14.4
Sample C Male 14.6
Sample D Male 14.6
Ventral hippocampus
nTPM: 16.6
Samples: 4

Max nTPM: 21.8
Min nTPM: 13.2
Sample A Female 15.4
Sample B Female 13.2
Sample C Male 21.8
Sample D Male 16.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 9.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 8.8
Samples: 4

Max nTPM: 9.9
Min nTPM: 6.8
Sample A Male 6.8
Sample B Male 9.7
Sample C Female 9.9
Sample D Female 8.9
Hippocampal formation
nTPM: 9.9
Samples: 4

Max nTPM: 12.0
Min nTPM: 8.0
Sample A Male 10.1
Sample B Male 9.5
Sample C Female 8.0
Sample D Female 12.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 20.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 20.2
532690 Antisense, RP_040825_01_E01, Mouse strain C57BL/6J (56 days, male) 20.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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