ABOUTMENU
HELP
NEWS
RTCB
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:33.5 nTPM
HPA:33.5 nTPM
GTEx:28.7 nTPM
FANTOM5:56.1 Scaled Tags Per Million
Pig:18.5 nTPM
Mouse:108.5 nTPM
Allen mouse:9.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001103
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 33.5
Sample id Sample description nTPM
Hippocampus
nTPM: 32.2
1898 Male, age 80, left hemisphere 34.8
2529 Female, age 94, left hemisphere 32.4
2621 Female, age 67, right hemisphere 32.1
1855 Male, age 76, left hemisphere 31.9
2148 Female, age 91, left hemisphere 31.5
1911 Female, age 85, right hemisphere 30.4
Dentate gyrus
nTPM: 32.2
2528 Male, age 74, both hemispheres 33.4
2010 Male, age 76, both hemispheres 33.2
1927 Female, age 91, both hemispheres 33.1
2530 Female, age 94, left hemisphere 32.2
2246 Female, age 85, both hemispheres 31.8
2531 Female, age 67, both hemispheres 29.6
Entorhinal gyrus
nTPM: 31.9
2764 Male, age 80, right hemisphere 34.1
1938 Female, age 85, left hemisphere 32.9
2117 Female, age 91, right hemisphere 32.8
1787 Male, age 76, left hemisphere 31.0
2686 Male, age 75, right hemisphere 30.8
2613 Female, age 94, left hemisphere 29.6
Hippocampus, CA1
nTPM: 33.5
2749 Male, age 80, left hemisphere 38.0
1873 Female, age 85, both hemispheres 34.0
2527 Male, age 74, both hemispheres 32.8
2082 Female, age 91, right hemisphere 32.1
2045 Male, age 76, both hemispheres 30.4
Hippocampus, CA2
nTPM: 33.4
1892 Male, age 76, both hemispheres 36.3
1963 Male, age 80, left hemisphere 35.5
2249 Male, age 74, both hemispheres 34.2
1940 Female, age 85, left hemisphere 32.9
2113 Female, age 91, right hemisphere 31.0
2437 Female, age 94, left hemisphere 30.6
Hippocampus, CA3
nTPM: 31.8
1867 Male, age 76, both hemispheres 34.0
2436 Male, age 74, both hemispheres 33.0
1891 Female, age 85, both hemispheres 32.0
2137 Male, age 80, left hemisphere 32.0
2620 Female, age 94, left hemisphere 30.9
2861 Female, age 67, both hemispheres 28.6
Parahippocampal cortex
nTPM: 31.4
1850 Male, age 80, both hemispheres 34.6
1990 Female, age 91, right hemisphere 32.5
1933 Female, age 85, both hemispheres 31.9
2018 Male, age 76, both hemispheres 31.5
2250 Female, age 67, right hemisphere 31.3
2245 Female, age 91, both hemispheres 31.2
2532 Female, age 72, left hemisphere 30.8
2693 Female, age 94, both hemispheres 30.7
2692 Male, age 74, both hemispheres 30.2
2622 Female, age 67, right hemisphere 28.7
Perirhinal gyrus
nTPM: 33.2
1794 Male, age 80, right hemisphere 35.1
1841 Female, age 85, right hemisphere 34.0
1847 Female, age 91, left hemisphere 33.8
2521 Female, age 94, right hemisphere 32.1
2848 Male, age 76, right hemisphere 31.1
Subiculum
nTPM: 31.8
1977 Female, age 85, both hemispheres 33.1
1901 Male, age 80, both hemispheres 32.4
2619 Male, age 74, both hemispheres 32.2
2042 Male, age 76, both hemispheres 32.0
2729 Female, age 91, right hemisphere 31.6
2438 Female, age 94, left hemisphere 29.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 28.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 28.7
Samples: 197

Max nTPM: 45.3
Min nTPM: 16.4
Std nTPM: 4.9
Median nTPM: 28.1
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 45.3
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 43.9
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 43.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 42.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 40.8
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 39.8
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 39.5
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 38.8
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 38.5
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 38.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 38.4
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 56.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 56.1
FF:10169-103B7 60 years, female 58.5
FF:10153-102I9 76 years, female 53.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 18.5
Samples: 4

Max nTPM: 23.2
Min nTPM: 14.9
Sample A Female 23.2
Sample B Female 19.0
Sample C Male 16.7
Sample D Male 14.9
Entorhinal cortex
nTPM: 14.4
Samples: 4

Max nTPM: 16.4
Min nTPM: 13.3
Sample A Female 14.1
Sample B Female 16.4
Sample C Male 13.3
Sample D Male 13.9
Subiculum
nTPM: 15.8
Samples: 4

Max nTPM: 20.1
Min nTPM: 12.8
Sample A Female 20.1
Sample B Female 15.7
Sample C Male 12.8
Sample D Male 14.6
Ventral hippocampus
nTPM: 16.6
Samples: 4

Max nTPM: 19.0
Min nTPM: 13.1
Sample A Female 18.1
Sample B Female 13.1
Sample C Male 19.0
Sample D Male 16.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 108.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 108.5
Samples: 4

Max nTPM: 122.3
Min nTPM: 101.1
Sample A Male 103.9
Sample B Male 101.1
Sample C Female 106.8
Sample D Female 122.3
Hippocampal formation
nTPM: 106.2
Samples: 4

Max nTPM: 119.4
Min nTPM: 96.5
Sample A Male 105.8
Sample B Male 103.1
Sample C Female 119.4
Sample D Female 96.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.7
532578 Antisense, RP_040810_02_B12, Mouse strain C57BL/6J (56 days, male) 9.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.