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SBF1
AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:50.8 nTPM
HPA:50.8 nTPM
GTEx:103.4 nTPM
FANTOM5:67.5 Scaled Tags Per Million
Pig:37.1 nTPM
Mouse:55.8 nTPM
Allen mouse:12.3 Expression energy

AMYGDALA - Annotated protein expression
Pending normal tissue analysis

AMYGDALA - HPA Brain RNA-seq
Max nTPM 50.8
Sample id Sample description nTPM
Amygdala
nTPM: 33.1
2517 Female, age 94, left hemisphere 41.1
2814 Male, age 76, right hemisphere 38.6
1987 Female, age 91, left hemisphere 32.2
2514 Male, age 75, right hemisphere 28.6
2695 Female, age 67, right hemisphere 25.0
Basal amygdala
nTPM: 50.8
2685 Female, age 94, left hemisphere 60.9
2827 Female, age 67, right hemisphere 60.4
2243 Female, age 91, right hemisphere 55.3
2110 Male, age 80, left hemisphere 51.5
1955 Male, age 76, both hemispheres 38.3
2609 Male, age 75, right hemisphere 38.3
Central amygdala
nTPM: 41.5
2826 Female, age 94, left hemisphere 59.8
2239 Male, age 80, left hemisphere 50.7
1905 Male, age 76, both hemispheres 36.1
2515 Male, age 75, right hemisphere 33.2
2701 Female, age 91, right hemisphere 27.9
Corticomedial amygdala
nTPM: 47.9
2535 Female, age 67, right hemisphere 68.5
2829 Male, age 80, left hemisphere 54.0
2429 Female, age 94, left hemisphere 52.2
2242 Female, age 91, right hemisphere 48.6
2428 Male, age 75, right hemisphere 36.6
2240 Male, age 76, both hemispheres 27.3
Lateral amygdala
nTPM: 48.0
2534 Female, age 94, left hemisphere 64.3
2256 Male, age 80, left hemisphere 54.0
2830 Female, age 67, right hemisphere 50.1
2255 Female, age 91, right hemisphere 47.3
1883 Male, age 76, both hemispheres 40.0
2516 Male, age 75, right hemisphere 32.2
Stria terminalis, bed nucleus
nTPM: 41.0
2486 Female, age 94, both hemispheres 50.9
1974 Female, age 91, both hemispheres 45.3
2201 Male, age 74, unknown 26.8

AMYGDALA - GTEx RNA-seqi
Average nTPM 103.4
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 103.4
Samples: 152

Max nTPM: 194.8
Min nTPM: 17.8
Std nTPM: 33.9
Median nTPM: 102.4
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 194.8
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 184.4
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 179.8
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 173.6
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 172.1
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 171.7
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 170.2
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 169.4
GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 164.5
GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 164.3
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 160.8
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 67.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 67.5
FF:10151-102I7 76 years, female 67.5

AMYGDALA - Pig RNA-seqi
Average nTPM 37.1
Pig sample Sample description nTPM
Amygdala
nTPM: 37.1
Samples: 4

Max nTPM: 44.4
Min nTPM: 30.7
Sample A Female 41.2
Sample B Female 30.7
Sample C Male 44.4
Sample D Male 32.1

AMYGDALA - Mouse RNA-seqi
Average nTPM 55.8
Mouse sample Sample description nTPM
Amygdala
nTPM: 55.8
Samples: 4

Max nTPM: 59.8
Min nTPM: 53.2
Sample A Male 53.2
Sample B Male 54.8
Sample C Female 59.8
Sample D Female 55.3

AMYGDALA - Allen Mouse ISHi
Max Expression energy 12.3
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 12.3
227739 Antisense, RP_040609_01_C09, Mouse strain C57BL/6J (56 days, male) 12.3
276264 Antisense, RP_040609_01_C09, Mouse strain C57BL/6J (56 days, male) 8.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.