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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
Mouse brain, Intensity
Hippocampal formationi 		75.329
RNA expressioni
Consensus:155.2 nTPM
HPA:155.2 nTPM
GTEx:151.2 nTPM
FANTOM5:221.5 Scaled Tags Per Million
Pig:138.2 nTPM
Mouse:417.0 nTPM
Allen mouse:17.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001097
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody HPA001097
Hippocampal formation mean intensity 75.329
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 41.987
Molecular layer of the dentate gyrus 43.981
Granular dentate gyrus 60.601
CA1 - oriens layer 54.915
CA1 - pyramidal layer 74.109
CA1 - radiatum layer 50.949
CA2 - oriens layer 47.441
CA2 - pyramidal layer 75.329
CA2 - radiatum layer 49.184
CA3 - oriens layer 56.222
CA3 - pyramidal layer 60.698
CA3 - radiatum layer 48.631
Stratum lucidum 47.076
Lacunosum moleculare 45.042
Subiculum 26.215

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 155.2
Sample id Sample description nTPM
Hippocampus
nTPM: 148.9
1898 Male, age 80, left hemisphere 177.3
2529 Female, age 94, left hemisphere 150.7
1855 Male, age 76, left hemisphere 146.8
2621 Female, age 67, right hemisphere 142.5
1911 Female, age 85, right hemisphere 138.5
2148 Female, age 91, left hemisphere 137.6
Dentate gyrus
nTPM: 142.8
2530 Female, age 94, left hemisphere 155.7
2010 Male, age 76, both hemispheres 153.7
2528 Male, age 74, both hemispheres 146.0
2246 Female, age 85, both hemispheres 140.2
1927 Female, age 91, both hemispheres 138.3
2531 Female, age 67, both hemispheres 122.8
Entorhinal gyrus
nTPM: 144.9
2764 Male, age 80, right hemisphere 155.6
2117 Female, age 91, right hemisphere 150.7
1787 Male, age 76, left hemisphere 142.3
1938 Female, age 85, left hemisphere 141.3
2613 Female, age 94, left hemisphere 141.1
2686 Male, age 75, right hemisphere 138.5
Hippocampus, CA1
nTPM: 155.2
2749 Male, age 80, left hemisphere 188.1
2527 Male, age 74, both hemispheres 167.8
1873 Female, age 85, both hemispheres 151.3
2045 Male, age 76, both hemispheres 136.4
2082 Female, age 91, right hemisphere 132.7
Hippocampus, CA2
nTPM: 149.3
1963 Male, age 80, left hemisphere 191.2
1892 Male, age 76, both hemispheres 149.4
2249 Male, age 74, both hemispheres 148.5
2437 Female, age 94, left hemisphere 145.8
2113 Female, age 91, right hemisphere 134.0
1940 Female, age 85, left hemisphere 127.0
Hippocampus, CA3
nTPM: 143.0
2137 Male, age 80, left hemisphere 158.4
2436 Male, age 74, both hemispheres 156.8
1867 Male, age 76, both hemispheres 139.3
1891 Female, age 85, both hemispheres 139.0
2861 Female, age 67, both hemispheres 133.6
2620 Female, age 94, left hemisphere 130.6
Parahippocampal cortex
nTPM: 142.9
1850 Male, age 80, both hemispheres 154.3
2245 Female, age 91, both hemispheres 150.2
2692 Male, age 74, both hemispheres 149.6
1990 Female, age 91, right hemisphere 142.5
2250 Female, age 67, right hemisphere 142.5
2622 Female, age 67, right hemisphere 142.2
1933 Female, age 85, both hemispheres 141.1
2532 Female, age 72, left hemisphere 140.4
2018 Male, age 76, both hemispheres 134.9
2693 Female, age 94, both hemispheres 131.4
Perirhinal gyrus
nTPM: 149.2
1847 Female, age 91, left hemisphere 165.3
1794 Male, age 80, right hemisphere 161.7
2521 Female, age 94, right hemisphere 144.5
1841 Female, age 85, right hemisphere 141.9
2848 Male, age 76, right hemisphere 132.6
Subiculum
nTPM: 143.7
2438 Female, age 94, left hemisphere 154.1
1977 Female, age 85, both hemispheres 146.6
1901 Male, age 80, both hemispheres 145.7
2619 Male, age 74, both hemispheres 145.2
2729 Female, age 91, right hemisphere 142.9
2042 Male, age 76, both hemispheres 127.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 151.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 151.2
Samples: 197

Max nTPM: 346.6
Min nTPM: 55.6
Std nTPM: 44.0
Median nTPM: 143.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 346.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 275.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 251.4
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 251.0
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 248.8
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 241.9
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 240.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 230.6
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 229.7
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 229.5
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 229.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 221.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 221.5
FF:10169-103B7 60 years, female 230.1
FF:10153-102I9 76 years, female 212.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 138.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 119.3
Samples: 4

Max nTPM: 144.1
Min nTPM: 86.6
Sample A Female 144.1
Sample B Female 121.7
Sample C Male 124.7
Sample D Male 86.6
Entorhinal cortex
nTPM: 138.2
Samples: 4

Max nTPM: 167.2
Min nTPM: 115.6
Sample A Female 128.5
Sample B Female 167.2
Sample C Male 141.3
Sample D Male 115.6
Subiculum
nTPM: 117.1
Samples: 4

Max nTPM: 152.5
Min nTPM: 89.9
Sample A Female 152.5
Sample B Female 117.2
Sample C Male 108.6
Sample D Male 89.9
Ventral hippocampus
nTPM: 119.8
Samples: 4

Max nTPM: 150.0
Min nTPM: 99.7
Sample A Female 114.6
Sample B Female 99.7
Sample C Male 150.0
Sample D Male 114.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 417.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 388.6
Samples: 4

Max nTPM: 405.4
Min nTPM: 368.1
Sample A Male 388.9
Sample B Male 368.1
Sample C Female 405.4
Sample D Female 392.1
Hippocampal formation
nTPM: 417.0
Samples: 4

Max nTPM: 436.1
Min nTPM: 386.5
Sample A Male 436.1
Sample B Male 386.5
Sample C Female 425.2
Sample D Female 420.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.8
67978674 Antisense, RP_040923_01_E08, Mouse strain C57BL/6J (56 days, male) 17.8

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The Human Protein Atlas

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