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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:25.7 nTPM
HPA:25.7 nTPM
GTEx:22.5 nTPM
FANTOM5:28.1 Scaled Tags Per Million
Pig:27.3 nTPM
Mouse:69.6 nTPM
Allen mouse:1.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 25.7
Sample id Sample description nTPM
Hippocampus
nTPM: 25.4
1898 Male, age 80, left hemisphere 26.8
1855 Male, age 76, left hemisphere 26.3
2529 Female, age 94, left hemisphere 25.7
2621 Female, age 67, right hemisphere 25.2
2148 Female, age 91, left hemisphere 24.4
1911 Female, age 85, right hemisphere 24.1
Dentate gyrus
nTPM: 24.1
2010 Male, age 76, both hemispheres 26.0
2530 Female, age 94, left hemisphere 25.9
2246 Female, age 85, both hemispheres 23.9
2528 Male, age 74, both hemispheres 23.5
1927 Female, age 91, both hemispheres 23.4
2531 Female, age 67, both hemispheres 22.0
Entorhinal gyrus
nTPM: 24.3
2117 Female, age 91, right hemisphere 27.1
1938 Female, age 85, left hemisphere 25.6
1787 Male, age 76, left hemisphere 25.3
2764 Male, age 80, right hemisphere 23.2
2686 Male, age 75, right hemisphere 22.5
2613 Female, age 94, left hemisphere 22.1
Hippocampus, CA1
nTPM: 25.1
2749 Male, age 80, left hemisphere 27.5
2527 Male, age 74, both hemispheres 26.1
1873 Female, age 85, both hemispheres 26.0
2082 Female, age 91, right hemisphere 23.3
2045 Male, age 76, both hemispheres 22.7
Hippocampus, CA2
nTPM: 24.8
2437 Female, age 94, left hemisphere 25.9
1892 Male, age 76, both hemispheres 25.3
2249 Male, age 74, both hemispheres 25.0
1940 Female, age 85, left hemisphere 24.9
1963 Male, age 80, left hemisphere 24.4
2113 Female, age 91, right hemisphere 23.2
Hippocampus, CA3
nTPM: 23.6
1867 Male, age 76, both hemispheres 24.7
1891 Female, age 85, both hemispheres 24.5
2137 Male, age 80, left hemisphere 24.3
2436 Male, age 74, both hemispheres 23.6
2620 Female, age 94, left hemisphere 22.1
2861 Female, age 67, both hemispheres 22.1
Parahippocampal cortex
nTPM: 24.3
2245 Female, age 91, both hemispheres 26.1
2018 Male, age 76, both hemispheres 25.5
1933 Female, age 85, both hemispheres 25.3
1850 Male, age 80, both hemispheres 25.1
2532 Female, age 72, left hemisphere 24.5
1990 Female, age 91, right hemisphere 24.2
2250 Female, age 67, right hemisphere 24.2
2692 Male, age 74, both hemispheres 23.7
2622 Female, age 67, right hemisphere 22.6
2693 Female, age 94, both hemispheres 21.9
Perirhinal gyrus
nTPM: 24.0
2521 Female, age 94, right hemisphere 25.2
1794 Male, age 80, right hemisphere 24.6
1847 Female, age 91, left hemisphere 24.1
1841 Female, age 85, right hemisphere 23.4
2848 Male, age 76, right hemisphere 22.7
Subiculum
nTPM: 25.7
2042 Male, age 76, both hemispheres 27.7
2438 Female, age 94, left hemisphere 26.8
1901 Male, age 80, both hemispheres 26.7
1977 Female, age 85, both hemispheres 26.4
2729 Female, age 91, right hemisphere 23.7
2619 Male, age 74, both hemispheres 23.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.5
Samples: 197

Max nTPM: 51.8
Min nTPM: 8.5
Std nTPM: 7.1
Median nTPM: 21.6
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 51.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 49.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 46.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 43.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 41.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 37.0
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 36.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 36.7
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 36.4
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 36.3
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 35.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 28.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 28.1
FF:10169-103B7 60 years, female 32.4
FF:10153-102I9 76 years, female 23.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 27.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 27.4
Samples: 4

Max nTPM: 35.7
Min nTPM: 21.3
Sample A Female 35.7
Sample B Female 24.2
Sample C Male 21.3
Sample D Male 28.2
Entorhinal cortex
nTPM: 18.5
Samples: 4

Max nTPM: 20.0
Min nTPM: 14.8
Sample A Female 19.3
Sample B Female 19.7
Sample C Male 20.0
Sample D Male 14.8
Subiculum
nTPM: 16.5
Samples: 4

Max nTPM: 21.0
Min nTPM: 14.0
Sample A Female 21.0
Sample B Female 15.5
Sample C Male 14.0
Sample D Male 15.4
Ventral hippocampus
nTPM: 21.3
Samples: 4

Max nTPM: 30.8
Min nTPM: 16.1
Sample A Female 17.5
Sample B Female 16.1
Sample C Male 20.9
Sample D Male 30.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 69.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 69.6
Samples: 4

Max nTPM: 76.5
Min nTPM: 61.1
Sample A Male 61.1
Sample B Male 76.5
Sample C Female 73.8
Sample D Female 67.1
Hippocampal formation
nTPM: 57.9
Samples: 4

Max nTPM: 69.7
Min nTPM: 51.2
Sample A Male 69.7
Sample B Male 51.2
Sample C Female 54.3
Sample D Female 56.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.5
583875 Antisense, RP_040831_01_D03, Mouse strain C57BL/6J (56 days, male) 1.5

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The Human Protein Atlas

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