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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:42.9 nTPM
HPA:42.9 nTPM
GTEx:47.6 nTPM
FANTOM5:131.5 Scaled Tags Per Million
Pig:32.9 nTPM
Mouse:22.7 nTPM
Allen mouse:11.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001378
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 42.9
Sample id Sample description nTPM
Hippocampus
nTPM: 40.7
2529 Female, age 94, left hemisphere 46.2
2621 Female, age 67, right hemisphere 41.7
1911 Female, age 85, right hemisphere 40.9
2148 Female, age 91, left hemisphere 40.2
1855 Male, age 76, left hemisphere 38.1
1898 Male, age 80, left hemisphere 37.1
Dentate gyrus
nTPM: 40.8
2530 Female, age 94, left hemisphere 46.5
2531 Female, age 67, both hemispheres 45.0
2246 Female, age 85, both hemispheres 40.9
2010 Male, age 76, both hemispheres 40.4
2528 Male, age 74, both hemispheres 36.2
1927 Female, age 91, both hemispheres 35.7
Entorhinal gyrus
nTPM: 40.2
2686 Male, age 75, right hemisphere 46.6
2117 Female, age 91, right hemisphere 41.0
1938 Female, age 85, left hemisphere 39.4
1787 Male, age 76, left hemisphere 38.9
2613 Female, age 94, left hemisphere 38.3
2764 Male, age 80, right hemisphere 37.1
Hippocampus, CA1
nTPM: 39.3
2527 Male, age 74, both hemispheres 41.2
2749 Male, age 80, left hemisphere 39.9
2045 Male, age 76, both hemispheres 39.8
1873 Female, age 85, both hemispheres 39.3
2082 Female, age 91, right hemisphere 36.4
Hippocampus, CA2
nTPM: 39.0
2437 Female, age 94, left hemisphere 42.9
1892 Male, age 76, both hemispheres 42.4
1940 Female, age 85, left hemisphere 38.7
2113 Female, age 91, right hemisphere 37.6
2249 Male, age 74, both hemispheres 36.7
1963 Male, age 80, left hemisphere 35.6
Hippocampus, CA3
nTPM: 41.8
2436 Male, age 74, both hemispheres 46.7
1867 Male, age 76, both hemispheres 44.4
2137 Male, age 80, left hemisphere 43.7
2861 Female, age 67, both hemispheres 40.9
1891 Female, age 85, both hemispheres 40.5
2620 Female, age 94, left hemisphere 34.8
Parahippocampal cortex
nTPM: 39.8
2245 Female, age 91, both hemispheres 45.2
2622 Female, age 67, right hemisphere 43.5
2532 Female, age 72, left hemisphere 42.8
2692 Male, age 74, both hemispheres 42.6
2018 Male, age 76, both hemispheres 41.2
1850 Male, age 80, both hemispheres 37.9
1933 Female, age 85, both hemispheres 37.8
2250 Female, age 67, right hemisphere 36.6
1990 Female, age 91, right hemisphere 36.1
2693 Female, age 94, both hemispheres 34.4
Perirhinal gyrus
nTPM: 35.8
2848 Male, age 76, right hemisphere 38.3
1841 Female, age 85, right hemisphere 36.4
2521 Female, age 94, right hemisphere 35.0
1847 Female, age 91, left hemisphere 34.9
1794 Male, age 80, right hemisphere 34.4
Subiculum
nTPM: 42.9
2438 Female, age 94, left hemisphere 51.9
2042 Male, age 76, both hemispheres 47.1
1901 Male, age 80, both hemispheres 43.0
2619 Male, age 74, both hemispheres 40.6
1977 Female, age 85, both hemispheres 38.5
2729 Female, age 91, right hemisphere 36.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 47.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 47.6
Samples: 197

Max nTPM: 85.2
Min nTPM: 17.0
Std nTPM: 10.3
Median nTPM: 46.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 85.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 82.1
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 78.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 76.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 76.0
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 75.7
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 71.1
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 67.8
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 65.5
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 64.0
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 63.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 131.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 131.5
FF:10153-102I9 76 years, female 154.2
FF:10169-103B7 60 years, female 108.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 32.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 32.9
Samples: 4

Max nTPM: 38.6
Min nTPM: 28.7
Sample A Female 31.3
Sample B Female 28.7
Sample C Male 38.6
Sample D Male 32.9
Entorhinal cortex
nTPM: 29.3
Samples: 4

Max nTPM: 33.2
Min nTPM: 24.8
Sample A Female 33.0
Sample B Female 26.0
Sample C Male 24.8
Sample D Male 33.2
Subiculum
nTPM: 32.0
Samples: 4

Max nTPM: 34.9
Min nTPM: 28.5
Sample A Female 34.9
Sample B Female 30.7
Sample C Male 28.5
Sample D Male 33.8
Ventral hippocampus
nTPM: 29.7
Samples: 4

Max nTPM: 32.3
Min nTPM: 27.3
Sample A Female 29.2
Sample B Female 30.1
Sample C Male 27.3
Sample D Male 32.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 22.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.0
Samples: 4

Max nTPM: 24.4
Min nTPM: 18.9
Sample A Male 23.3
Sample B Male 24.4
Sample C Female 21.5
Sample D Female 18.9
Hippocampal formation
nTPM: 22.7
Samples: 4

Max nTPM: 24.9
Min nTPM: 20.5
Sample A Male 23.2
Sample B Male 24.9
Sample C Female 20.5
Sample D Female 22.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.2
69816386 Antisense, RP_050505_04_H09, Mouse strain C57BL/6J (56 days, male) 11.7
70919603 Antisense, RP_050713_01_F09, Mouse strain C57BL/6J (56 days, male) 10.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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