ABOUTMENU
HELP
NEWS
HTATSF1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:51.5 nTPM
HPA:51.5 nTPM
GTEx:57.2 nTPM
FANTOM5:68.6 Scaled Tags Per Million
Pig:17.6 nTPM
Mouse:52.9 nTPM
Allen mouse:4.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000504
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 51.5
Sample id Sample description nTPM
Hippocampus
nTPM: 51.0
2529 Female, age 94, left hemisphere 56.2
1898 Male, age 80, left hemisphere 52.3
1855 Male, age 76, left hemisphere 49.9
1911 Female, age 85, right hemisphere 49.8
2148 Female, age 91, left hemisphere 49.5
2621 Female, age 67, right hemisphere 48.3
Dentate gyrus
nTPM: 50.1
2530 Female, age 94, left hemisphere 52.3
2010 Male, age 76, both hemispheres 51.0
2246 Female, age 85, both hemispheres 49.7
2528 Male, age 74, both hemispheres 49.5
1927 Female, age 91, both hemispheres 49.0
2531 Female, age 67, both hemispheres 48.9
Entorhinal gyrus
nTPM: 48.8
2686 Male, age 75, right hemisphere 52.6
2117 Female, age 91, right hemisphere 50.5
1938 Female, age 85, left hemisphere 49.5
2764 Male, age 80, right hemisphere 48.0
1787 Male, age 76, left hemisphere 47.9
2613 Female, age 94, left hemisphere 44.4
Hippocampus, CA1
nTPM: 51.0
2045 Male, age 76, both hemispheres 53.2
2527 Male, age 74, both hemispheres 52.8
2749 Male, age 80, left hemisphere 51.3
1873 Female, age 85, both hemispheres 51.1
2082 Female, age 91, right hemisphere 46.4
Hippocampus, CA2
nTPM: 48.9
2437 Female, age 94, left hemisphere 52.5
1892 Male, age 76, both hemispheres 50.9
2113 Female, age 91, right hemisphere 48.3
2249 Male, age 74, both hemispheres 48.3
1940 Female, age 85, left hemisphere 46.8
1963 Male, age 80, left hemisphere 46.6
Hippocampus, CA3
nTPM: 48.0
1867 Male, age 76, both hemispheres 50.1
2137 Male, age 80, left hemisphere 50.0
1891 Female, age 85, both hemispheres 49.4
2861 Female, age 67, both hemispheres 46.4
2620 Female, age 94, left hemisphere 46.1
2436 Male, age 74, both hemispheres 45.7
Parahippocampal cortex
nTPM: 48.7
2245 Female, age 91, both hemispheres 52.1
1850 Male, age 80, both hemispheres 50.7
1933 Female, age 85, both hemispheres 50.4
2250 Female, age 67, right hemisphere 49.1
2018 Male, age 76, both hemispheres 48.8
2692 Male, age 74, both hemispheres 48.8
1990 Female, age 91, right hemisphere 48.5
2532 Female, age 72, left hemisphere 47.4
2622 Female, age 67, right hemisphere 46.0
2693 Female, age 94, both hemispheres 44.9
Perirhinal gyrus
nTPM: 49.4
1841 Female, age 85, right hemisphere 50.7
2848 Male, age 76, right hemisphere 50.2
1847 Female, age 91, left hemisphere 50.0
1794 Male, age 80, right hemisphere 48.7
2521 Female, age 94, right hemisphere 47.5
Subiculum
nTPM: 51.5
2438 Female, age 94, left hemisphere 65.8
1901 Male, age 80, both hemispheres 50.0
2042 Male, age 76, both hemispheres 49.5
2729 Female, age 91, right hemisphere 49.1
1977 Female, age 85, both hemispheres 47.6
2619 Male, age 74, both hemispheres 47.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 57.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 57.2
Samples: 197

Max nTPM: 124.2
Min nTPM: 29.1
Std nTPM: 11.1
Median nTPM: 54.5
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 124.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 104.7
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 92.4
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 90.7
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 80.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 79.7
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 77.2
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 76.4
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 75.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 74.7
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 74.6
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 68.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 68.6
FF:10169-103B7 60 years, female 78.4
FF:10153-102I9 76 years, female 58.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 17.6
Samples: 4

Max nTPM: 22.8
Min nTPM: 13.1
Sample A Female 22.8
Sample B Female 15.3
Sample C Male 19.2
Sample D Male 13.1
Entorhinal cortex
nTPM: 14.1
Samples: 4

Max nTPM: 15.6
Min nTPM: 13.0
Sample A Female 14.0
Sample B Female 15.6
Sample C Male 13.8
Sample D Male 13.0
Subiculum
nTPM: 16.6
Samples: 4

Max nTPM: 21.3
Min nTPM: 13.8
Sample A Female 21.3
Sample B Female 16.0
Sample C Male 15.4
Sample D Male 13.8
Ventral hippocampus
nTPM: 15.6
Samples: 4

Max nTPM: 17.6
Min nTPM: 12.9
Sample A Female 15.6
Sample B Female 12.9
Sample C Male 17.6
Sample D Male 16.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 52.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 47.3
Samples: 4

Max nTPM: 50.2
Min nTPM: 45.2
Sample A Male 47.4
Sample B Male 46.4
Sample C Female 45.2
Sample D Female 50.2
Hippocampal formation
nTPM: 52.9
Samples: 4

Max nTPM: 58.1
Min nTPM: 47.1
Sample A Male 49.2
Sample B Male 57.3
Sample C Female 58.1
Sample D Female 47.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.6
69059923 Antisense, RP_050317_04_E04, Mouse strain C57BL/6J (56 days, male) 4.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.