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AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:53.4 nTPM
HPA:53.4 nTPM
GTEx:62.3 nTPM
FANTOM5:51.5 Scaled Tags Per Million
Pig:15.2 nTPM
Mouse:43.7 nTPM
Allen mouse:4.9 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 53.4
Sample id Sample description nTPM
Amygdala
nTPM: 53.4
2695 Female, age 67, right hemisphere 58.1
2514 Male, age 75, right hemisphere 54.5
2814 Male, age 76, right hemisphere 53.7
1987 Female, age 91, left hemisphere 52.5
2517 Female, age 94, left hemisphere 48.2
Basal amygdala
nTPM: 50.0
2609 Male, age 75, right hemisphere 55.5
1955 Male, age 76, both hemispheres 50.7
2827 Female, age 67, right hemisphere 50.4
2243 Female, age 91, right hemisphere 49.0
2110 Male, age 80, left hemisphere 48.0
2685 Female, age 94, left hemisphere 46.6
Central amygdala
nTPM: 51.5
2515 Male, age 75, right hemisphere 53.2
2826 Female, age 94, left hemisphere 52.2
1905 Male, age 76, both hemispheres 51.4
2239 Male, age 80, left hemisphere 50.9
2701 Female, age 91, right hemisphere 49.8
Corticomedial amygdala
nTPM: 50.9
2428 Male, age 75, right hemisphere 54.7
2240 Male, age 76, both hemispheres 52.8
2829 Male, age 80, left hemisphere 50.2
2242 Female, age 91, right hemisphere 49.8
2429 Female, age 94, left hemisphere 49.3
2535 Female, age 67, right hemisphere 48.5
Lateral amygdala
nTPM: 50.7
2516 Male, age 75, right hemisphere 55.7
2830 Female, age 67, right hemisphere 53.0
1883 Male, age 76, both hemispheres 51.3
2534 Female, age 94, left hemisphere 49.4
2255 Female, age 91, right hemisphere 47.4
2256 Male, age 80, left hemisphere 47.2
Stria terminalis, bed nucleus
nTPM: 51.4
2201 Male, age 74, unknown 57.7
1974 Female, age 91, both hemispheres 49.7
2486 Female, age 94, both hemispheres 46.8

AMYGDALA - GTEx RNA-seqi
Average nTPM 62.3
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 62.3
Samples: 152

Max nTPM: 101.1
Min nTPM: 24.0
Std nTPM: 12.1
Median nTPM: 60.5
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 101.1
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 100.4
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 86.4
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 86.1
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 86.1
GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 85.9
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 84.7
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 84.4
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 82.1
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 81.9
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 81.3
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 51.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 51.5
FF:10151-102I7 76 years, female 51.5

AMYGDALA - Pig RNA-seqi
Average nTPM 15.2
Pig sample Sample description nTPM
Amygdala
nTPM: 15.2
Samples: 4

Max nTPM: 18.1
Min nTPM: 13.3
Sample A Female 18.1
Sample B Female 15.3
Sample C Male 13.3
Sample D Male 14.2

AMYGDALA - Mouse RNA-seqi
Average nTPM 43.7
Mouse sample Sample description nTPM
Amygdala
nTPM: 43.7
Samples: 4

Max nTPM: 45.4
Min nTPM: 41.6
Sample A Male 45.4
Sample B Male 41.6
Sample C Female 44.0
Sample D Female 43.7

AMYGDALA - Allen Mouse ISHi
Max Expression energy 4.9
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 4.9
69059923 Antisense, RP_050317_04_E04, Mouse strain C57BL/6J (56 days, male) 4.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.