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ARHGEF7
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:44.2 nTPM
HPA:44.2 nTPM
GTEx:35.2 nTPM
FANTOM5:69.4 Scaled Tags Per Million
Pig:35.2 nTPM
Mouse:48.2 nTPM
Allen mouse:1.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA004744
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 44.2
Sample id Sample description nTPM
Hippocampus
nTPM: 26.7
2148 Female, age 91, left hemisphere 31.3
2621 Female, age 67, right hemisphere 30.6
1911 Female, age 85, right hemisphere 28.8
2529 Female, age 94, left hemisphere 24.8
1898 Male, age 80, left hemisphere 22.7
1855 Male, age 76, left hemisphere 22.1
Dentate gyrus
nTPM: 33.0
2531 Female, age 67, both hemispheres 47.1
1927 Female, age 91, both hemispheres 42.0
2246 Female, age 85, both hemispheres 32.3
2528 Male, age 74, both hemispheres 28.8
2010 Male, age 76, both hemispheres 24.3
2530 Female, age 94, left hemisphere 23.6
Entorhinal gyrus
nTPM: 37.2
2613 Female, age 94, left hemisphere 49.6
2764 Male, age 80, right hemisphere 45.1
1938 Female, age 85, left hemisphere 36.6
1787 Male, age 76, left hemisphere 35.6
2117 Female, age 91, right hemisphere 28.9
2686 Male, age 75, right hemisphere 27.6
Hippocampus, CA1
nTPM: 38.3
2749 Male, age 80, left hemisphere 63.9
2045 Male, age 76, both hemispheres 40.4
2527 Male, age 74, both hemispheres 30.1
1873 Female, age 85, both hemispheres 29.2
2082 Female, age 91, right hemisphere 28.2
Hippocampus, CA2
nTPM: 30.0
1963 Male, age 80, left hemisphere 37.4
1892 Male, age 76, both hemispheres 34.2
1940 Female, age 85, left hemisphere 31.4
2113 Female, age 91, right hemisphere 28.7
2437 Female, age 94, left hemisphere 27.3
2249 Male, age 74, both hemispheres 20.9
Hippocampus, CA3
nTPM: 40.4
2137 Male, age 80, left hemisphere 71.8
1867 Male, age 76, both hemispheres 41.4
2620 Female, age 94, left hemisphere 41.4
1891 Female, age 85, both hemispheres 33.1
2861 Female, age 67, both hemispheres 31.6
2436 Male, age 74, both hemispheres 23.1
Parahippocampal cortex
nTPM: 39.3
2693 Female, age 94, both hemispheres 46.5
2532 Female, age 72, left hemisphere 44.2
1850 Male, age 80, both hemispheres 43.7
1990 Female, age 91, right hemisphere 41.5
1933 Female, age 85, both hemispheres 40.8
2245 Female, age 91, both hemispheres 39.2
2250 Female, age 67, right hemisphere 38.1
2018 Male, age 76, both hemispheres 34.6
2622 Female, age 67, right hemisphere 32.4
2692 Male, age 74, both hemispheres 32.4
Perirhinal gyrus
nTPM: 44.2
1841 Female, age 85, right hemisphere 48.3
1847 Female, age 91, left hemisphere 46.2
2848 Male, age 76, right hemisphere 43.8
1794 Male, age 80, right hemisphere 43.7
2521 Female, age 94, right hemisphere 38.9
Subiculum
nTPM: 32.5
1901 Male, age 80, both hemispheres 42.9
1977 Female, age 85, both hemispheres 38.6
2042 Male, age 76, both hemispheres 33.7
2729 Female, age 91, right hemisphere 29.5
2619 Male, age 74, both hemispheres 28.3
2438 Female, age 94, left hemisphere 22.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 35.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 35.2
Samples: 197

Max nTPM: 65.2
Min nTPM: 19.4
Std nTPM: 7.3
Median nTPM: 34.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 65.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 59.3
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 54.3
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 52.0
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 52.0
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 50.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 49.4
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 49.1
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 48.9
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 48.9
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 48.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 69.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 69.4
FF:10153-102I9 76 years, female 69.7
FF:10169-103B7 60 years, female 69.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 35.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 28.9
Samples: 4

Max nTPM: 33.2
Min nTPM: 22.5
Sample A Female 33.2
Sample B Female 29.6
Sample C Male 30.1
Sample D Male 22.5
Entorhinal cortex
nTPM: 35.2
Samples: 4

Max nTPM: 37.5
Min nTPM: 33.2
Sample A Female 36.6
Sample B Female 33.2
Sample C Male 37.5
Sample D Male 33.6
Subiculum
nTPM: 32.7
Samples: 4

Max nTPM: 40.9
Min nTPM: 28.2
Sample A Female 40.9
Sample B Female 32.0
Sample C Male 29.8
Sample D Male 28.2
Ventral hippocampus
nTPM: 29.8
Samples: 4

Max nTPM: 35.7
Min nTPM: 24.6
Sample A Female 26.3
Sample B Female 24.6
Sample C Male 35.7
Sample D Male 32.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 48.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 48.2
Samples: 4

Max nTPM: 53.5
Min nTPM: 44.6
Sample A Male 44.6
Sample B Male 48.7
Sample C Female 46.0
Sample D Female 53.5
Hippocampal formation
nTPM: 46.4
Samples: 4

Max nTPM: 49.2
Min nTPM: 40.4
Sample A Male 49.2
Sample B Male 47.5
Sample C Female 48.6
Sample D Female 40.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.1
76003447 Antisense, RP_060608_02_D09, Mouse strain C57BL/6J (56 days, male) 1.1

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