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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:28.1 nTPM
HPA:28.1 nTPM
GTEx:35.4 nTPM
FANTOM5:28.5 Scaled Tags Per Million
Pig:5.7 nTPM
Mouse:9.4 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006531
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 28.1
Sample id Sample description nTPM
Hippocampus
nTPM: 26.8
2529 Female, age 94, left hemisphere 29.1
1898 Male, age 80, left hemisphere 28.0
1855 Male, age 76, left hemisphere 26.2
1911 Female, age 85, right hemisphere 26.1
2148 Female, age 91, left hemisphere 26.1
2621 Female, age 67, right hemisphere 25.6
Dentate gyrus
nTPM: 27.6
2530 Female, age 94, left hemisphere 32.4
2010 Male, age 76, both hemispheres 27.8
2246 Female, age 85, both hemispheres 27.3
1927 Female, age 91, both hemispheres 26.2
2531 Female, age 67, both hemispheres 26.0
2528 Male, age 74, both hemispheres 25.8
Entorhinal gyrus
nTPM: 28.0
1787 Male, age 76, left hemisphere 29.6
2764 Male, age 80, right hemisphere 29.1
1938 Female, age 85, left hemisphere 28.6
2613 Female, age 94, left hemisphere 28.6
2117 Female, age 91, right hemisphere 26.9
2686 Male, age 75, right hemisphere 25.3
Hippocampus, CA1
nTPM: 27.8
2749 Male, age 80, left hemisphere 31.6
2527 Male, age 74, both hemispheres 27.8
1873 Female, age 85, both hemispheres 27.5
2082 Female, age 91, right hemisphere 27.3
2045 Male, age 76, both hemispheres 24.7
Hippocampus, CA2
nTPM: 27.4
2437 Female, age 94, left hemisphere 28.9
1892 Male, age 76, both hemispheres 28.0
2249 Male, age 74, both hemispheres 27.6
1963 Male, age 80, left hemisphere 27.4
1940 Female, age 85, left hemisphere 26.6
2113 Female, age 91, right hemisphere 26.1
Hippocampus, CA3
nTPM: 26.4
2137 Male, age 80, left hemisphere 27.7
1867 Male, age 76, both hemispheres 26.8
2620 Female, age 94, left hemisphere 26.7
2861 Female, age 67, both hemispheres 26.7
2436 Male, age 74, both hemispheres 25.7
1891 Female, age 85, both hemispheres 24.7
Parahippocampal cortex
nTPM: 26.9
2250 Female, age 67, right hemisphere 29.1
2245 Female, age 91, both hemispheres 28.0
1990 Female, age 91, right hemisphere 27.8
2532 Female, age 72, left hemisphere 27.7
1850 Male, age 80, both hemispheres 27.3
1933 Female, age 85, both hemispheres 27.2
2018 Male, age 76, both hemispheres 26.4
2622 Female, age 67, right hemisphere 25.8
2692 Male, age 74, both hemispheres 25.0
2693 Female, age 94, both hemispheres 24.3
Perirhinal gyrus
nTPM: 28.1
1794 Male, age 80, right hemisphere 31.3
1847 Female, age 91, left hemisphere 28.9
2521 Female, age 94, right hemisphere 27.9
1841 Female, age 85, right hemisphere 27.3
2848 Male, age 76, right hemisphere 25.3
Subiculum
nTPM: 26.9
1977 Female, age 85, both hemispheres 28.9
2619 Male, age 74, both hemispheres 27.5
2438 Female, age 94, left hemisphere 27.4
1901 Male, age 80, both hemispheres 26.4
2729 Female, age 91, right hemisphere 25.7
2042 Male, age 76, both hemispheres 25.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 35.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 35.4
Samples: 197

Max nTPM: 67.3
Min nTPM: 12.8
Std nTPM: 8.5
Median nTPM: 34.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 67.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 65.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 63.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 57.8
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 55.1
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 55.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 54.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 53.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 52.3
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 50.8
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 50.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 28.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 28.5
FF:10169-103B7 60 years, female 30.3
FF:10153-102I9 76 years, female 26.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 5.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 5.7
Samples: 4

Max nTPM: 7.7
Min nTPM: 3.9
Sample A Female 7.7
Sample B Female 5.1
Sample C Male 5.9
Sample D Male 3.9
Entorhinal cortex
nTPM: 5.4
Samples: 4

Max nTPM: 6.3
Min nTPM: 4.2
Sample A Female 5.0
Sample B Female 6.3
Sample C Male 5.9
Sample D Male 4.2
Subiculum
nTPM: 5.7
Samples: 4

Max nTPM: 7.4
Min nTPM: 4.6
Sample A Female 7.4
Sample B Female 5.5
Sample C Male 5.1
Sample D Male 4.6
Ventral hippocampus
nTPM: 5.4
Samples: 4

Max nTPM: 6.0
Min nTPM: 4.1
Sample A Female 6.0
Sample B Female 4.1
Sample C Male 6.0
Sample D Male 5.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 9.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.4
Samples: 4

Max nTPM: 10.4
Min nTPM: 7.6
Sample A Male 10.4
Sample B Male 10.1
Sample C Female 9.5
Sample D Female 7.6
Hippocampal formation
nTPM: 9.0
Samples: 4

Max nTPM: 9.9
Min nTPM: 8.2
Sample A Male 9.9
Sample B Male 9.0
Sample C Female 8.2
Sample D Female 8.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
67765728 Antisense, RP_040916_01_G01, Mouse strain C57BL/6J (56 days, male) 0.3

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