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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:22.7 nTPM
HPA:22.7 nTPM
GTEx:19.1 nTPM
FANTOM5:91.2 Scaled Tags Per Million
Pig:20.1 nTPM
Mouse:44.7 nTPM
Allen mouse:7.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047911
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 22.7
Sample id Sample description nTPM
Hippocampus
nTPM: 20.1
2621 Female, age 67, right hemisphere 23.3
2148 Female, age 91, left hemisphere 21.5
1855 Male, age 76, left hemisphere 20.4
1911 Female, age 85, right hemisphere 19.1
1898 Male, age 80, left hemisphere 18.9
2529 Female, age 94, left hemisphere 17.4
Dentate gyrus
nTPM: 21.5
2531 Female, age 67, both hemispheres 23.4
1927 Female, age 91, both hemispheres 22.7
2010 Male, age 76, both hemispheres 21.8
2528 Male, age 74, both hemispheres 21.2
2246 Female, age 85, both hemispheres 20.1
2530 Female, age 94, left hemisphere 19.8
Entorhinal gyrus
nTPM: 18.8
2117 Female, age 91, right hemisphere 19.1
2613 Female, age 94, left hemisphere 19.0
2764 Male, age 80, right hemisphere 18.8
1938 Female, age 85, left hemisphere 18.7
1787 Male, age 76, left hemisphere 18.5
2686 Male, age 75, right hemisphere 18.4
Hippocampus, CA1
nTPM: 22.7
2045 Male, age 76, both hemispheres 24.4
1873 Female, age 85, both hemispheres 22.8
2082 Female, age 91, right hemisphere 22.8
2749 Male, age 80, left hemisphere 22.7
2527 Male, age 74, both hemispheres 21.0
Hippocampus, CA2
nTPM: 20.4
1892 Male, age 76, both hemispheres 23.4
1963 Male, age 80, left hemisphere 21.4
2113 Female, age 91, right hemisphere 20.3
2249 Male, age 74, both hemispheres 19.3
2437 Female, age 94, left hemisphere 19.2
1940 Female, age 85, left hemisphere 18.7
Hippocampus, CA3
nTPM: 21.7
2620 Female, age 94, left hemisphere 25.3
2137 Male, age 80, left hemisphere 23.0
2861 Female, age 67, both hemispheres 21.8
1891 Female, age 85, both hemispheres 20.6
1867 Male, age 76, both hemispheres 20.5
2436 Male, age 74, both hemispheres 19.0
Parahippocampal cortex
nTPM: 20.0
2693 Female, age 94, both hemispheres 24.3
2018 Male, age 76, both hemispheres 22.5
2692 Male, age 74, both hemispheres 21.0
2532 Female, age 72, left hemisphere 19.6
2250 Female, age 67, right hemisphere 19.3
1990 Female, age 91, right hemisphere 19.1
1933 Female, age 85, both hemispheres 18.9
2622 Female, age 67, right hemisphere 18.8
1850 Male, age 80, both hemispheres 18.6
2245 Female, age 91, both hemispheres 18.0
Perirhinal gyrus
nTPM: 20.2
2848 Male, age 76, right hemisphere 21.2
2521 Female, age 94, right hemisphere 20.8
1841 Female, age 85, right hemisphere 20.4
1847 Female, age 91, left hemisphere 20.3
1794 Male, age 80, right hemisphere 18.6
Subiculum
nTPM: 18.4
2729 Female, age 91, right hemisphere 22.1
1977 Female, age 85, both hemispheres 19.3
1901 Male, age 80, both hemispheres 19.0
2619 Male, age 74, both hemispheres 17.9
2042 Male, age 76, both hemispheres 17.2
2438 Female, age 94, left hemisphere 14.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.1
Samples: 197

Max nTPM: 35.9
Min nTPM: 12.3
Std nTPM: 3.6
Median nTPM: 18.8
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 35.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 31.5
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 29.6
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 29.4
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 28.2
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 27.9
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 27.9
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 27.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 27.0
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 26.8
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 26.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 91.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 91.2
FF:10169-103B7 60 years, female 116.1
FF:10153-102I9 76 years, female 66.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 20.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 20.1
Samples: 4

Max nTPM: 23.5
Min nTPM: 16.4
Sample A Female 23.5
Sample B Female 20.6
Sample C Male 19.9
Sample D Male 16.4
Entorhinal cortex
nTPM: 16.1
Samples: 4

Max nTPM: 18.9
Min nTPM: 13.3
Sample A Female 15.4
Sample B Female 18.9
Sample C Male 16.8
Sample D Male 13.3
Subiculum
nTPM: 17.2
Samples: 4

Max nTPM: 20.3
Min nTPM: 15.5
Sample A Female 20.3
Sample B Female 16.5
Sample C Male 16.4
Sample D Male 15.5
Ventral hippocampus
nTPM: 18.6
Samples: 4

Max nTPM: 21.2
Min nTPM: 16.8
Sample A Female 21.2
Sample B Female 16.8
Sample C Male 17.9
Sample D Male 18.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 44.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 44.7
Samples: 4

Max nTPM: 48.3
Min nTPM: 41.0
Sample A Male 43.5
Sample B Male 45.9
Sample C Female 41.0
Sample D Female 48.3
Hippocampal formation
nTPM: 44.7
Samples: 4

Max nTPM: 48.6
Min nTPM: 41.6
Sample A Male 41.6
Sample B Male 45.0
Sample C Female 48.6
Sample D Female 43.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.6
2373 Antisense, RP_040420_01_A03, Mouse strain C57BL/6J (56 days, male) 7.6
2374 Antisense, RP_040420_01_A03, Mouse strain C57BL/6J (56 days, male) 5.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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