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ARRDC2
BASAL GANGLIA - Expression summary
Protein expression
Caudatei
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:61.3 nTPM
HPA:61.3 nTPM
GTEx:36.1 nTPM
FANTOM5:85.1 Scaled Tags Per Million
Pig:5.4 nTPM
Mouse:3.5 nTPM
Allen mouse:0.0 Expression energy

CAUDATE - Antibody stainingi
Antibody HPA053788
Glial cells Not detected
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 61.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 37.3
2288 Male, age 75, left hemisphere 41.7
1781 Male, age 74, unknown 39.4
2846 Female, age 79, unknown 39.0
2290 Female, age 72, unknown 37.8
2481 Female, age 94, left hemisphere 36.7
1854 Male, age 80, left hemisphere 36.2
2289 Male, age 61, right hemisphere 35.5
1857 Female, age 85, left hemisphere 32.0
Claustrum
nTPM: 47.3
2292 Female, age 85, both hemispheres 59.5
1956 Male, age 74, unknown 51.3
2196 Female, age 79, unknown 49.5
2198 Male, age 80, both hemispheres 47.4
2491 Male, age 75, both hemispheres 45.7
2645 Female, age 72, unknown 44.0
2284 Female, age 91, both hemispheres 43.2
2392 Female, age 94, both hemispheres 42.8
2568 Male, age 61, both hemispheres 42.1
Globus pallidus, externus
nTPM: 61.3
2567 Female, age 72, unknown 68.1
1996 Male, age 80, right hemisphere 65.0
2646 Male, age 61, right hemisphere 61.0
2772 Female, age 79, unknown 57.8
2395 Male, age 75, both hemispheres 54.8
Globus pallidus, internus
nTPM: 60.0
2111 Female, age 85, right hemisphere 68.4
2778 Female, age 91, both hemispheres 63.8
2566 Female, age 72, unknown 61.0
2483 Female, age 94, right hemisphere 58.7
2287 Male, age 75, right hemisphere 58.4
1818 Male, age 74, unknown 55.6
2037 Male, age 80, right hemisphere 54.2
Nucleus accumbens
nTPM: 38.9
2732 Male, age 80, right hemisphere 48.9
2391 Female, age 94, left hemisphere 42.2
2286 Male, age 75, left hemisphere 40.5
2698 Female, age 72, unknown 40.4
1783 Male, age 74, unknown 36.9
1806 Female, age 85, left hemisphere 36.1
2824 Male, age 61, right hemisphere 33.4
1856 Female, age 91, right hemisphere 32.5
Nucleus basalis of Meynert
nTPM: 46.6
2569 Male, age 61, both hemispheres 62.3
2484 Female, age 94, left hemisphere 43.1
2821 Male, age 75, both hemispheres 42.4
2393 Male, age 80, right hemisphere 38.6
Nucleus of the diagonal band
nTPM: 33.2
1812 Female, age 91, both hemispheres 34.9
2029 Male, age 61, right hemisphere 33.9
1979 Male, age 74, unknown 33.1
2195 Female, age 85, both hemispheres 32.3
2775 Male, age 80, right hemisphere 31.9
Olfactory tubercle
nTPM: 34.9
2487 Female, age 94, left hemisphere 36.5
1998 Female, age 91, both hemispheres 35.7
2856 Male, age 75, right hemisphere 34.4
1846 Male, age 80, right hemisphere 32.9
Putamen
nTPM: 41.4
2489 Female, age 72, unknown 48.0
2647 Male, age 75, left hemisphere 47.5
1829 Male, age 74, unknown 43.1
2482 Female, age 94, left hemisphere 41.1
2466 Female, age 79, unknown 39.7
1937 Female, age 91, right hemisphere 37.9
1838 Male, age 80, right hemisphere 32.4
Septal nuclei
nTPM: 36.0
2394 Male, age 61, left hemisphere 43.9
2199 Male, age 80, right hemisphere 36.9
2059 Female, age 85, both hemispheres 35.9
2031 Female, age 72, unknown 34.5
1960 Male, age 74, unknown 34.4
2009 Female, age 91, both hemispheres 33.3
2629 Female, age 94, right hemisphere 32.9

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 36.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 23.6
Samples: 246

Max nTPM: 131.4
Min nTPM: 3.2
Std nTPM: 14.8
Median nTPM: 19.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 131.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 86.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 66.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 63.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 59.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 58.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 58.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 53.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 51.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 51.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 50.8
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 17.3
Samples: 246

Max nTPM: 80.7
Min nTPM: 3.8
Std nTPM: 12.8
Median nTPM: 13.7
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 80.7
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 78.0
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 72.1
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 66.1
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 65.3
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 58.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 55.1
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 53.9
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 50.9
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 46.3
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 44.8
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Brain - Putamen (basal ganglia)
Average nTPM: 36.1
Samples: 205

Max nTPM: 163.2
Min nTPM: 5.7
Std nTPM: 19.9
Median nTPM: 32.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 163.2
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 114.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 92.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 88.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 84.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 84.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 82.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 75.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 70.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 66.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 66.0
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 85.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 17.4
FF:10164-103B2 76 years, female 17.4
Globus pallidus
Scaled Tags Per Million: 85.1
FF:10161-103A8 76 years, female 96.8
FF:10175-103C4 60 years, female 73.4
Nucleus accumbens
Scaled Tags Per Million: 21.2
FF:10037-101F1 23-56 years, mixed 21.2
Putamen
Scaled Tags Per Million: 15.8
FF:10176-103C5 60 years, female 15.8

BASAL GANGLIA - Pig RNA-seqi
Average nTPM 5.4
Pig sample Sample description nTPM
Caudate
nTPM: 3.3
Samples: 4

Max nTPM: 4.2
Min nTPM: 2.6
Sample A Female 2.6
Sample B Female 4.2
Sample C Male 3.8
Sample D Male 2.7
Putamen
nTPM: 5.4
Samples: 4

Max nTPM: 6.5
Min nTPM: 4.7
Sample A Female 6.5
Sample B Female 5.3
Sample C Male 5.2
Sample D Male 4.7
Septum
nTPM: 4.1
Samples: 4

Max nTPM: 4.6
Min nTPM: 3.4
Sample A Female 3.4
Sample B Female 4.5
Sample C Male 4.6
Sample D Male 4.0
Ventral pallidum
nTPM: 4.8
Samples: 4

Max nTPM: 6.5
Min nTPM: 2.7
Sample A Female 2.7
Sample B Female 5.7
Sample C Male 6.5
Sample D Male 4.2

BASAL GANGLIA - Mouse RNA-seqi
Average nTPM 3.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 3.0
Samples: 4

Max nTPM: 3.9
Min nTPM: 1.2
Sample A Male 1.2
Sample B Male 3.6
Sample C Female 3.9
Sample D Female 3.3
Septum
nTPM: 3.5
Samples: 4

Max nTPM: 5.1
Min nTPM: 1.8
Sample A Male 3.0
Sample B Male 1.8
Sample C Female 5.1
Sample D Female 3.9
Ventral forebrain
nTPM: 2.6
Samples: 4

Max nTPM: 3.2
Min nTPM: 1.2
Sample A Male 3.2
Sample B Male 1.2
Sample C Female 3.0
Sample D Female 3.0

BASAL GANGLIA - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.0
68523330 Antisense, RP_050118_02_E09, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 0.0
68523330 Antisense, RP_050118_02_E09, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

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