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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:34.4 nTPM
HPA:34.4 nTPM
GTEx:35.6 nTPM
FANTOM5:42.4 Scaled Tags Per Million
Pig:42.9 nTPM
Mouse:142.4 nTPM
Allen mouse:18.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019514Antibody HPA020347
Glial cells LowMedium
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 34.4
Sample id Sample description nTPM
Hippocampus
nTPM: 30.2
1898 Male, age 80, left hemisphere 36.0
2148 Female, age 91, left hemisphere 32.3
2621 Female, age 67, right hemisphere 30.7
2529 Female, age 94, left hemisphere 28.5
1855 Male, age 76, left hemisphere 28.2
1911 Female, age 85, right hemisphere 25.4
Dentate gyrus
nTPM: 30.3
2530 Female, age 94, left hemisphere 34.8
1927 Female, age 91, both hemispheres 31.4
2010 Male, age 76, both hemispheres 31.3
2528 Male, age 74, both hemispheres 29.6
2246 Female, age 85, both hemispheres 28.6
2531 Female, age 67, both hemispheres 26.1
Entorhinal gyrus
nTPM: 33.1
2764 Male, age 80, right hemisphere 36.0
2613 Female, age 94, left hemisphere 35.4
1787 Male, age 76, left hemisphere 32.4
2117 Female, age 91, right hemisphere 32.4
1938 Female, age 85, left hemisphere 31.9
2686 Male, age 75, right hemisphere 30.8
Hippocampus, CA1
nTPM: 30.0
2749 Male, age 80, left hemisphere 36.7
1873 Female, age 85, both hemispheres 29.4
2527 Male, age 74, both hemispheres 29.1
2045 Male, age 76, both hemispheres 27.7
2082 Female, age 91, right hemisphere 27.2
Hippocampus, CA2
nTPM: 31.1
2249 Male, age 74, both hemispheres 34.2
1892 Male, age 76, both hemispheres 32.8
1963 Male, age 80, left hemisphere 32.4
2437 Female, age 94, left hemisphere 30.7
1940 Female, age 85, left hemisphere 30.3
2113 Female, age 91, right hemisphere 26.2
Hippocampus, CA3
nTPM: 34.2
2436 Male, age 74, both hemispheres 55.8
2137 Male, age 80, left hemisphere 31.3
2861 Female, age 67, both hemispheres 31.3
2620 Female, age 94, left hemisphere 30.1
1867 Male, age 76, both hemispheres 28.6
1891 Female, age 85, both hemispheres 28.0
Parahippocampal cortex
nTPM: 31.1
1850 Male, age 80, both hemispheres 35.6
1990 Female, age 91, right hemisphere 33.8
2622 Female, age 67, right hemisphere 33.2
2245 Female, age 91, both hemispheres 32.5
2692 Male, age 74, both hemispheres 31.0
2532 Female, age 72, left hemisphere 30.2
2693 Female, age 94, both hemispheres 30.1
1933 Female, age 85, both hemispheres 30.0
2250 Female, age 67, right hemisphere 29.0
2018 Male, age 76, both hemispheres 25.7
Perirhinal gyrus
nTPM: 34.4
1794 Male, age 80, right hemisphere 39.4
1847 Female, age 91, left hemisphere 38.3
2521 Female, age 94, right hemisphere 33.1
1841 Female, age 85, right hemisphere 30.8
2848 Male, age 76, right hemisphere 30.4
Subiculum
nTPM: 29.8
2438 Female, age 94, left hemisphere 31.4
1901 Male, age 80, both hemispheres 31.1
2619 Male, age 74, both hemispheres 31.0
1977 Female, age 85, both hemispheres 30.0
2729 Female, age 91, right hemisphere 29.0
2042 Male, age 76, both hemispheres 26.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 35.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 35.6
Samples: 197

Max nTPM: 51.1
Min nTPM: 18.0
Std nTPM: 6.1
Median nTPM: 36.0
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 51.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 49.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 49.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 48.9
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 48.6
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 47.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 46.4
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 46.4
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 46.2
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 45.9
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 45.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 42.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 42.4
FF:10169-103B7 60 years, female 47.0
FF:10153-102I9 76 years, female 37.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 42.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 42.4
Samples: 4

Max nTPM: 56.1
Min nTPM: 30.1
Sample A Female 56.1
Sample B Female 40.4
Sample C Male 43.0
Sample D Male 30.1
Entorhinal cortex
nTPM: 43.0
Samples: 4

Max nTPM: 46.0
Min nTPM: 38.9
Sample A Female 46.0
Sample B Female 44.1
Sample C Male 42.8
Sample D Male 38.9
Subiculum
nTPM: 38.7
Samples: 4

Max nTPM: 50.0
Min nTPM: 33.7
Sample A Female 50.0
Sample B Female 33.7
Sample C Male 37.4
Sample D Male 33.8
Ventral hippocampus
nTPM: 42.8
Samples: 4

Max nTPM: 53.6
Min nTPM: 27.8
Sample A Female 45.0
Sample B Female 27.8
Sample C Male 53.6
Sample D Male 44.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 142.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 141.1
Samples: 4

Max nTPM: 156.1
Min nTPM: 131.2
Sample A Male 140.2
Sample B Male 131.2
Sample C Female 136.8
Sample D Female 156.1
Hippocampal formation
nTPM: 142.4
Samples: 4

Max nTPM: 156.0
Min nTPM: 131.2
Sample A Male 131.2
Sample B Male 139.4
Sample C Female 156.0
Sample D Female 143.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 18.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 18.1
68193022 Antisense, RP_040825_01_A12, Mouse strain C57BL/6J (56 days, male) 18.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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