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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:36.7 nTPM
HPA:36.7 nTPM
GTEx:28.4 nTPM
FANTOM5:42.9 Scaled Tags Per Million
Pig:6.9 nTPM
Mouse:11.7 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA011862Antibody HPA067440Antibody CAB000096Antibody CAB072873
Glial cells Not detectedNot detectedNot detectedNot detected
Neuronal cells LowNot detectedNot detectedNot detected









HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 36.7
Sample id Sample description nTPM
Hippocampus
nTPM: 36.0
2529 Female, age 94, left hemisphere 40.8
2621 Female, age 67, right hemisphere 39.6
1855 Male, age 76, left hemisphere 36.2
1911 Female, age 85, right hemisphere 35.0
2148 Female, age 91, left hemisphere 32.7
1898 Male, age 80, left hemisphere 31.9
Dentate gyrus
nTPM: 34.5
2530 Female, age 94, left hemisphere 45.4
2531 Female, age 67, both hemispheres 37.4
2528 Male, age 74, both hemispheres 31.5
1927 Female, age 91, both hemispheres 30.9
2010 Male, age 76, both hemispheres 30.9
2246 Female, age 85, both hemispheres 30.8
Entorhinal gyrus
nTPM: 30.6
2686 Male, age 75, right hemisphere 33.1
1787 Male, age 76, left hemisphere 31.6
2117 Female, age 91, right hemisphere 31.2
2613 Female, age 94, left hemisphere 31.1
1938 Female, age 85, left hemisphere 28.4
2764 Male, age 80, right hemisphere 28.3
Hippocampus, CA1
nTPM: 31.4
2527 Male, age 74, both hemispheres 34.5
2082 Female, age 91, right hemisphere 34.2
1873 Female, age 85, both hemispheres 30.7
2045 Male, age 76, both hemispheres 30.6
2749 Male, age 80, left hemisphere 27.1
Hippocampus, CA2
nTPM: 34.5
2437 Female, age 94, left hemisphere 40.1
2113 Female, age 91, right hemisphere 36.4
2249 Male, age 74, both hemispheres 34.3
1963 Male, age 80, left hemisphere 32.7
1940 Female, age 85, left hemisphere 32.5
1892 Male, age 76, both hemispheres 30.8
Hippocampus, CA3
nTPM: 36.7
2861 Female, age 67, both hemispheres 50.9
2620 Female, age 94, left hemisphere 38.0
1867 Male, age 76, both hemispheres 36.2
1891 Female, age 85, both hemispheres 32.8
2436 Male, age 74, both hemispheres 32.5
2137 Male, age 80, left hemisphere 30.0
Parahippocampal cortex
nTPM: 31.0
2622 Female, age 67, right hemisphere 34.5
2245 Female, age 91, both hemispheres 33.2
2018 Male, age 76, both hemispheres 32.9
2692 Male, age 74, both hemispheres 32.3
2532 Female, age 72, left hemisphere 31.6
1990 Female, age 91, right hemisphere 31.4
2693 Female, age 94, both hemispheres 29.2
2250 Female, age 67, right hemisphere 29.1
1850 Male, age 80, both hemispheres 28.1
1933 Female, age 85, both hemispheres 27.9
Perirhinal gyrus
nTPM: 29.0
2521 Female, age 94, right hemisphere 29.9
1841 Female, age 85, right hemisphere 29.7
2848 Male, age 76, right hemisphere 28.9
1847 Female, age 91, left hemisphere 28.6
1794 Male, age 80, right hemisphere 28.0
Subiculum
nTPM: 32.8
2042 Male, age 76, both hemispheres 37.0
2619 Male, age 74, both hemispheres 34.5
2438 Female, age 94, left hemisphere 33.8
2729 Female, age 91, right hemisphere 31.7
1901 Male, age 80, both hemispheres 30.3
1977 Female, age 85, both hemispheres 29.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 28.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 28.4
Samples: 197

Max nTPM: 107.8
Min nTPM: 3.5
Std nTPM: 18.2
Median nTPM: 23.7
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 107.8
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 96.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 93.6
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 92.3
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 90.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 80.7
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 73.3
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 68.7
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 68.4
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 66.0
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 63.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 42.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 42.9
FF:10153-102I9 76 years, female 50.2
FF:10169-103B7 60 years, female 35.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 6.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 5.5
Samples: 4

Max nTPM: 6.5
Min nTPM: 4.7
Sample A Female 4.9
Sample B Female 4.7
Sample C Male 6.5
Sample D Male 6.0
Entorhinal cortex
nTPM: 6.9
Samples: 4

Max nTPM: 8.0
Min nTPM: 6.2
Sample A Female 6.6
Sample B Female 6.2
Sample C Male 8.0
Sample D Male 6.9
Subiculum
nTPM: 5.7
Samples: 4

Max nTPM: 6.6
Min nTPM: 4.6
Sample A Female 5.3
Sample B Female 4.6
Sample C Male 6.4
Sample D Male 6.6
Ventral hippocampus
nTPM: 6.7
Samples: 4

Max nTPM: 9.3
Min nTPM: 5.4
Sample A Female 5.4
Sample B Female 5.5
Sample C Male 9.3
Sample D Male 6.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 11.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 11.7
Samples: 4

Max nTPM: 12.8
Min nTPM: 10.3
Sample A Male 12.4
Sample B Male 10.3
Sample C Female 11.4
Sample D Female 12.8
Hippocampal formation
nTPM: 10.8
Samples: 4

Max nTPM: 12.5
Min nTPM: 9.7
Sample A Male 9.7
Sample B Male 10.6
Sample C Female 10.5
Sample D Female 12.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
68637957 Antisense, RP_050126_02_A01, Mouse strain C57BL/6J (56 days, male) 0.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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