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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:84.4 nTPM
HPA:84.4 nTPM
GTEx:70.2 nTPM
FANTOM5:27.8 Scaled Tags Per Million
Pig:53.1 nTPM
Mouse:194.4 nTPM
Allen mouse:13.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036544
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 84.4
Sample id Sample description nTPM
Hippocampus
nTPM: 80.8
1898 Male, age 80, left hemisphere 85.0
2529 Female, age 94, left hemisphere 84.5
2621 Female, age 67, right hemisphere 81.1
2148 Female, age 91, left hemisphere 78.8
1911 Female, age 85, right hemisphere 77.9
1855 Male, age 76, left hemisphere 77.7
Dentate gyrus
nTPM: 79.8
2530 Female, age 94, left hemisphere 81.9
1927 Female, age 91, both hemispheres 81.2
2528 Male, age 74, both hemispheres 80.7
2010 Male, age 76, both hemispheres 79.4
2246 Female, age 85, both hemispheres 79.4
2531 Female, age 67, both hemispheres 76.4
Entorhinal gyrus
nTPM: 82.9
2764 Male, age 80, right hemisphere 86.2
2613 Female, age 94, left hemisphere 84.2
1938 Female, age 85, left hemisphere 83.6
2117 Female, age 91, right hemisphere 82.1
1787 Male, age 76, left hemisphere 81.6
2686 Male, age 75, right hemisphere 79.5
Hippocampus, CA1
nTPM: 81.5
2749 Male, age 80, left hemisphere 87.5
2527 Male, age 74, both hemispheres 81.7
1873 Female, age 85, both hemispheres 80.0
2045 Male, age 76, both hemispheres 79.7
2082 Female, age 91, right hemisphere 78.4
Hippocampus, CA2
nTPM: 81.9
1892 Male, age 76, both hemispheres 85.5
1963 Male, age 80, left hemisphere 83.6
2249 Male, age 74, both hemispheres 83.3
2437 Female, age 94, left hemisphere 82.4
1940 Female, age 85, left hemisphere 79.0
2113 Female, age 91, right hemisphere 77.4
Hippocampus, CA3
nTPM: 81.2
1867 Male, age 76, both hemispheres 83.4
2436 Male, age 74, both hemispheres 82.0
2137 Male, age 80, left hemisphere 81.7
2620 Female, age 94, left hemisphere 80.8
1891 Female, age 85, both hemispheres 80.6
2861 Female, age 67, both hemispheres 79.0
Parahippocampal cortex
nTPM: 81.3
1850 Male, age 80, both hemispheres 85.6
1990 Female, age 91, right hemisphere 82.9
1933 Female, age 85, both hemispheres 82.2
2245 Female, age 91, both hemispheres 82.1
2250 Female, age 67, right hemisphere 81.7
2532 Female, age 72, left hemisphere 81.1
2692 Male, age 74, both hemispheres 80.8
2622 Female, age 67, right hemisphere 80.1
2018 Male, age 76, both hemispheres 78.9
2693 Female, age 94, both hemispheres 77.2
Perirhinal gyrus
nTPM: 84.4
1847 Female, age 91, left hemisphere 87.7
1794 Male, age 80, right hemisphere 87.5
1841 Female, age 85, right hemisphere 86.1
2848 Male, age 76, right hemisphere 80.7
2521 Female, age 94, right hemisphere 80.2
Subiculum
nTPM: 81.5
1901 Male, age 80, both hemispheres 83.8
2619 Male, age 74, both hemispheres 82.8
1977 Female, age 85, both hemispheres 82.5
2438 Female, age 94, left hemisphere 82.1
2729 Female, age 91, right hemisphere 79.2
2042 Male, age 76, both hemispheres 78.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 70.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 70.2
Samples: 197

Max nTPM: 127.1
Min nTPM: 34.7
Std nTPM: 15.1
Median nTPM: 67.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 127.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 124.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 117.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 113.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 109.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 109.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 107.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 101.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 101.3
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 99.5
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 99.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 27.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 27.8
FF:10153-102I9 76 years, female 29.5
FF:10169-103B7 60 years, female 26.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 53.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 53.1
Samples: 4

Max nTPM: 73.1
Min nTPM: 33.2
Sample A Female 73.1
Sample B Female 48.6
Sample C Male 57.5
Sample D Male 33.2
Entorhinal cortex
nTPM: 42.4
Samples: 4

Max nTPM: 49.3
Min nTPM: 33.6
Sample A Female 44.9
Sample B Female 49.3
Sample C Male 41.8
Sample D Male 33.6
Subiculum
nTPM: 42.8
Samples: 4

Max nTPM: 54.3
Min nTPM: 37.9
Sample A Female 54.3
Sample B Female 38.6
Sample C Male 37.9
Sample D Male 40.5
Ventral hippocampus
nTPM: 50.3
Samples: 4

Max nTPM: 61.6
Min nTPM: 33.3
Sample A Female 56.3
Sample B Female 33.3
Sample C Male 61.6
Sample D Male 49.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 194.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 185.6
Samples: 4

Max nTPM: 197.0
Min nTPM: 165.0
Sample A Male 183.9
Sample B Male 197.0
Sample C Female 196.4
Sample D Female 165.0
Hippocampal formation
nTPM: 194.4
Samples: 4

Max nTPM: 209.7
Min nTPM: 184.2
Sample A Male 209.7
Sample B Male 184.2
Sample C Female 184.3
Sample D Female 199.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.0
71608215 Antisense, RP_050927_01_B11, Mouse strain C57BL/6J (56 days, male) 13.8
79556640 Antisense, RP_071204_01_A04, Mouse strain C57BL/6J (56 days, male) 12.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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