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LHPP
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni
Consensus:129.7 nTPM
HPA:129.7 nTPM
GTEx:137.0 nTPM
FANTOM5:81.1 Scaled Tags Per Million
Pig:83.0 nTPM
Mouse:28.5 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA009163Antibody HPA009269
Glial cells MediumMedium
Neuronal cells LowLow



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 129.7
Sample id Sample description nTPM
Hippocampus
nTPM: 123.8
2529 Female, age 94, left hemisphere 130.8
1911 Female, age 85, right hemisphere 126.4
2621 Female, age 67, right hemisphere 125.0
1855 Male, age 76, left hemisphere 121.8
2148 Female, age 91, left hemisphere 120.1
1898 Male, age 80, left hemisphere 118.8
Dentate gyrus
nTPM: 126.6
2530 Female, age 94, left hemisphere 163.0
2010 Male, age 76, both hemispheres 124.7
2246 Female, age 85, both hemispheres 124.6
2531 Female, age 67, both hemispheres 119.0
2528 Male, age 74, both hemispheres 117.8
1927 Female, age 91, both hemispheres 110.7
Entorhinal gyrus
nTPM: 126.8
2117 Female, age 91, right hemisphere 142.1
2764 Male, age 80, right hemisphere 128.5
2686 Male, age 75, right hemisphere 126.1
1787 Male, age 76, left hemisphere 122.5
1938 Female, age 85, left hemisphere 121.9
2613 Female, age 94, left hemisphere 119.4
Hippocampus, CA1
nTPM: 118.7
1873 Female, age 85, both hemispheres 123.4
2527 Male, age 74, both hemispheres 122.8
2082 Female, age 91, right hemisphere 117.1
2749 Male, age 80, left hemisphere 115.4
2045 Male, age 76, both hemispheres 114.6
Hippocampus, CA2
nTPM: 120.2
2437 Female, age 94, left hemisphere 125.0
1940 Female, age 85, left hemisphere 122.7
1963 Male, age 80, left hemisphere 120.3
2249 Male, age 74, both hemispheres 120.3
2113 Female, age 91, right hemisphere 118.4
1892 Male, age 76, both hemispheres 114.6
Hippocampus, CA3
nTPM: 115.2
1891 Female, age 85, both hemispheres 126.0
2861 Female, age 67, both hemispheres 116.7
1867 Male, age 76, both hemispheres 115.8
2137 Male, age 80, left hemisphere 112.0
2620 Female, age 94, left hemisphere 111.2
2436 Male, age 74, both hemispheres 109.4
Parahippocampal cortex
nTPM: 120.2
2692 Male, age 74, both hemispheres 129.5
2532 Female, age 72, left hemisphere 128.3
2245 Female, age 91, both hemispheres 124.8
1933 Female, age 85, both hemispheres 120.9
2622 Female, age 67, right hemisphere 119.8
2018 Male, age 76, both hemispheres 119.4
1990 Female, age 91, right hemisphere 118.4
1850 Male, age 80, both hemispheres 116.7
2250 Female, age 67, right hemisphere 113.4
2693 Female, age 94, both hemispheres 110.9
Perirhinal gyrus
nTPM: 113.6
2848 Male, age 76, right hemisphere 117.6
1841 Female, age 85, right hemisphere 115.0
1794 Male, age 80, right hemisphere 114.7
1847 Female, age 91, left hemisphere 110.7
2521 Female, age 94, right hemisphere 109.8
Subiculum
nTPM: 129.7
2042 Male, age 76, both hemispheres 140.1
2438 Female, age 94, left hemisphere 134.8
1901 Male, age 80, both hemispheres 131.5
1977 Female, age 85, both hemispheres 126.9
2619 Male, age 74, both hemispheres 124.6
2729 Female, age 91, right hemisphere 120.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 137.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 137.0
Samples: 197

Max nTPM: 586.8
Min nTPM: 19.8
Std nTPM: 72.7
Median nTPM: 123.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 586.8
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 457.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 416.7
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 315.7
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 305.7
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 285.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 281.0
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 278.6
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 272.6
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 264.6
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 262.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 81.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 81.1
FF:10153-102I9 76 years, female 81.7
FF:10169-103B7 60 years, female 80.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 83.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 83.0
Samples: 4

Max nTPM: 107.6
Min nTPM: 61.0
Sample A Female 107.6
Sample B Female 85.2
Sample C Male 78.1
Sample D Male 61.0
Entorhinal cortex
nTPM: 68.5
Samples: 4

Max nTPM: 73.6
Min nTPM: 61.3
Sample A Female 66.4
Sample B Female 73.6
Sample C Male 72.7
Sample D Male 61.3
Subiculum
nTPM: 61.9
Samples: 4

Max nTPM: 79.8
Min nTPM: 48.2
Sample A Female 79.8
Sample B Female 58.6
Sample C Male 60.8
Sample D Male 48.2
Ventral hippocampus
nTPM: 76.2
Samples: 4

Max nTPM: 99.2
Min nTPM: 51.5
Sample A Female 67.4
Sample B Female 51.5
Sample C Male 86.8
Sample D Male 99.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 28.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 24.0
Samples: 4

Max nTPM: 27.0
Min nTPM: 20.5
Sample A Male 21.4
Sample B Male 20.5
Sample C Female 26.9
Sample D Female 27.0
Hippocampal formation
nTPM: 28.6
Samples: 4

Max nTPM: 31.7
Min nTPM: 25.2
Sample A Male 29.6
Sample B Male 25.2
Sample C Female 31.7
Sample D Female 27.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
69202358 Antisense, RP_050324_03_E03, Mouse strain C57BL/6J (56 days, male) 1.1
72340126 Antisense, RP_051101_02_A06, Mouse strain C57BL/6J (56 days, male) 0.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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