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RNF167
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:141.5 nTPM
HPA:141.5 nTPM
GTEx:106.9 nTPM
FANTOM5:94.6 Scaled Tags Per Million
Pig:37.9 nTPM
Mouse:65.2 nTPM
Allen mouse:6.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA049810
Glial cells Not detected
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 141.5
Sample id Sample description nTPM
Hippocampus
nTPM: 136.9
2621 Female, age 67, right hemisphere 139.3
1898 Male, age 80, left hemisphere 138.5
2529 Female, age 94, left hemisphere 138.0
1855 Male, age 76, left hemisphere 137.8
2148 Female, age 91, left hemisphere 134.0
1911 Female, age 85, right hemisphere 133.5
Dentate gyrus
nTPM: 134.6
2246 Female, age 85, both hemispheres 138.6
2530 Female, age 94, left hemisphere 137.9
2010 Male, age 76, both hemispheres 135.0
2528 Male, age 74, both hemispheres 133.7
1927 Female, age 91, both hemispheres 132.6
2531 Female, age 67, both hemispheres 130.0
Entorhinal gyrus
nTPM: 138.9
2613 Female, age 94, left hemisphere 140.6
2764 Male, age 80, right hemisphere 140.1
1938 Female, age 85, left hemisphere 139.0
2117 Female, age 91, right hemisphere 138.2
2686 Male, age 75, right hemisphere 138.1
1787 Male, age 76, left hemisphere 137.6
Hippocampus, CA1
nTPM: 136.6
2749 Male, age 80, left hemisphere 140.4
2527 Male, age 74, both hemispheres 136.7
2045 Male, age 76, both hemispheres 136.2
1873 Female, age 85, both hemispheres 135.8
2082 Female, age 91, right hemisphere 133.7
Hippocampus, CA2
nTPM: 137.2
1892 Male, age 76, both hemispheres 140.1
1940 Female, age 85, left hemisphere 139.8
2249 Male, age 74, both hemispheres 138.0
1963 Male, age 80, left hemisphere 136.4
2437 Female, age 94, left hemisphere 136.1
2113 Female, age 91, right hemisphere 132.6
Hippocampus, CA3
nTPM: 135.8
1891 Female, age 85, both hemispheres 137.8
2620 Female, age 94, left hemisphere 136.8
2137 Male, age 80, left hemisphere 136.2
1867 Male, age 76, both hemispheres 135.8
2436 Male, age 74, both hemispheres 135.2
2861 Female, age 67, both hemispheres 133.0
Parahippocampal cortex
nTPM: 137.4
2532 Female, age 72, left hemisphere 142.2
2692 Male, age 74, both hemispheres 141.6
1850 Male, age 80, both hemispheres 140.8
1933 Female, age 85, both hemispheres 138.9
2622 Female, age 67, right hemisphere 136.8
2250 Female, age 67, right hemisphere 136.2
2693 Female, age 94, both hemispheres 136.1
1990 Female, age 91, right hemisphere 135.8
2245 Female, age 91, both hemispheres 135.1
2018 Male, age 76, both hemispheres 131.0
Perirhinal gyrus
nTPM: 139.1
2848 Male, age 76, right hemisphere 140.5
1794 Male, age 80, right hemisphere 140.4
1841 Female, age 85, right hemisphere 139.8
1847 Female, age 91, left hemisphere 138.0
2521 Female, age 94, right hemisphere 137.0
Subiculum
nTPM: 141.5
2438 Female, age 94, left hemisphere 151.4
2619 Male, age 74, both hemispheres 145.8
2042 Male, age 76, both hemispheres 141.5
1901 Male, age 80, both hemispheres 139.1
1977 Female, age 85, both hemispheres 138.9
2729 Female, age 91, right hemisphere 132.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 106.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 106.9
Samples: 197

Max nTPM: 163.7
Min nTPM: 54.5
Std nTPM: 19.9
Median nTPM: 104.8
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 163.7
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 153.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 148.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 148.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 148.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 148.2
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 146.2
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 145.7
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 143.8
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 143.2
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 142.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 94.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 94.6
FF:10169-103B7 60 years, female 101.4
FF:10153-102I9 76 years, female 87.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 37.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 38.0
Samples: 4

Max nTPM: 49.0
Min nTPM: 29.9
Sample A Female 49.0
Sample B Female 35.2
Sample C Male 37.7
Sample D Male 29.9
Entorhinal cortex
nTPM: 29.5
Samples: 4

Max nTPM: 32.9
Min nTPM: 26.1
Sample A Female 32.9
Sample B Female 28.5
Sample C Male 30.6
Sample D Male 26.1
Subiculum
nTPM: 31.3
Samples: 4

Max nTPM: 40.7
Min nTPM: 26.5
Sample A Female 40.7
Sample B Female 26.5
Sample C Male 29.5
Sample D Male 28.5
Ventral hippocampus
nTPM: 35.5
Samples: 4

Max nTPM: 42.2
Min nTPM: 24.1
Sample A Female 35.0
Sample B Female 24.1
Sample C Male 42.2
Sample D Male 40.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 65.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 57.5
Samples: 4

Max nTPM: 63.2
Min nTPM: 54.1
Sample A Male 56.3
Sample B Male 56.3
Sample C Female 54.1
Sample D Female 63.2
Hippocampal formation
nTPM: 65.2
Samples: 4

Max nTPM: 74.0
Min nTPM: 61.3
Sample A Male 61.9
Sample B Male 61.3
Sample C Female 74.0
Sample D Female 63.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.9
686202 Antisense, RP_040916_01_A10, Mouse strain C57BL/6J (56 days, male) 6.9

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