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RNF167
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:145.4 nTPM
HPA:145.4 nTPM
GTEx:108.3 nTPM
FANTOM5:115.2 Scaled Tags Per Million
Pig:49.0 nTPM
Mouse:48.9 nTPM
Allen mouse:0.5 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 145.4
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 145.4
2666 Male, age 74, left hemisphere 154.7
1833 Male, age 53, unknown 148.4
2586 Male, age 75, left hemisphere 148.2
2828 Female, age 72, unknown 145.8
2019 Male, age 18, unknown 144.7
2411 Female, age 72, unknown 144.1
1870 Female, age 42, unknown 144.0
1827 Male, age 72, unknown 143.6
1830 Male, age 51, unknown 141.3
2219 Male, age 76, both hemispheres 139.2
Dorsal raphe nucleus
nTPM: 138.1
2750 Male, age 76, both hemispheres 144.3
1828 Male, age 53, unknown 140.4
2298 Female, age 72, unknown 137.1
2047 Male, age 72, unknown 134.9
2016 Female, age 72, unknown 133.7
Inferior colliculus
nTPM: 137.0
2849 Male, age 72, unknown 142.9
1848 Female, age 42, unknown 136.3
1890 Male, age 53, unknown 135.5
2097 Female, age 72, unknown 133.3
Median raphe nucleus
nTPM: 145.0
2220 Male, age 76, midline 145.0
Pedunculopontine tegmental nucleus
nTPM: 143.1
2338 Male, age 61, both hemispheres 146.5
2334 Male, age 80, both hemispheres 143.2
1921 Female, age 85, both hemispheres 139.4
Periaquaductal grey, anterior
nTPM: 135.7
1795 Male, age 51, unknown 137.6
1947 Male, age 18, unknown 137.1
2502 Female, age 75, unknown 132.4
Periaquaductal grey, dorsal
nTPM: 137.0
2850 Male, age 76, both hemispheres 144.6
1831 Male, age 72, unknown 139.1
2464 Female, age 72, unknown 132.4
1840 Male, age 53, unknown 131.9
Periaquaductal grey, lateral
nTPM: 137.1
2272 Male, age 74, both hemispheres 137.9
2140 Male, age 76, both hemispheres 136.9
2053 Male, age 18, unknown 136.4
Pretectal area
nTPM: 142.5
1815 Male, age 53, unknown 153.7
1817 Female, age 42, unknown 150.2
1816 Male, age 51, unknown 147.6
2007 Male, age 72, unknown 147.4
2667 Female, age 75, unknown 143.2
1944 Female, age 72, unknown 142.4
2407 Male, age 75, both hemispheres 138.6
2825 Male, age 18, unknown 137.5
2224 Female, age 72, unknown 136.3
2273 Male, age 74, both hemispheres 135.3
2316 Male, age 76, right hemisphere 134.9
Red nucleus
nTPM: 143.9
1821 Female, age 72, unknown 147.4
2725 Female, age 75, unknown 147.1
2588 Male, age 74, left hemisphere 146.2
2785 Male, age 18, unknown 145.7
1865 Male, age 51, unknown 144.0
2584 Male, age 75, left hemisphere 143.2
1904 Male, age 53, unknown 143.1
2769 Male, age 72, unknown 143.1
2823 Male, age 76, right hemisphere 142.9
1954 Female, age 42, unknown 142.3
2503 Female, age 72, unknown 141.5
2227 Male, age 72, unknown 140.6
Substantia nigra
nTPM: 139.4
2583 Male, age 75, right hemisphere 143.9
2665 Male, age 74, both hemispheres 143.1
2699 Male, age 18, unknown 142.7
1889 Female, age 72, unknown 142.5
1916 Female, age 42, unknown 141.9
1851 Male, age 51, unknown 141.1
1941 Male, age 53, unknown 137.4
2590 Female, age 75, unknown 135.3
2241 Male, age 72, unknown 132.9
2409 Female, age 72, unknown 132.7
Superior colliculus
nTPM: 141.7
1913 Female, age 42, unknown 146.2
2668 Female, age 75, unknown 146.2
1995 Male, age 72, unknown 143.7
2664 Male, age 75, both hemispheres 142.4
1895 Male, age 76, right hemisphere 141.1
2261 Male, age 18, unknown 140.5
2087 Female, age 72, unknown 140.2
1796 Male, age 53, unknown 139.9
1839 Male, age 51, unknown 139.1
2587 Male, age 74, left hemisphere 138.1
Ventral tegmental area
nTPM: 139.7
2223 Female, age 72, unknown 143.4
2218 Male, age 76, both hemispheres 141.8
2410 Female, age 72, unknown 141.7
1915 Female, age 42, unknown 138.5
1942 Male, age 51, unknown 136.6
2021 Male, age 53, unknown 136.2

MIDBRAIN - GTEx RNA-seqi
Average nTPM 108.3
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 108.3
Samples: 139

Max nTPM: 200.5
Min nTPM: 59.6
Std nTPM: 22.2
Median nTPM: 104.5
GTEX-ZE9C-0011-R2a-SM-4WKGH 60-69 years, male 200.5
GTEX-1LVA9-0011-R2a-SM-EZ6MJ 50-59 years, male 180.8
GTEX-1LB8K-0011-R2a-SM-EZ6MQ 50-59 years, male 178.7
GTEX-1MA7X-0011-R2b-SM-EZ6MT 60-69 years, male 155.5
GTEX-1IKOH-0011-R2a-SM-CMKHO 60-69 years, female 154.5
GTEX-1RLM8-0011-R2a-SM-EZ6N4 50-59 years, male 153.4
GTEX-13NYB-0011-R2a-SM-5MR3C 40-49 years, male 153.1
GTEX-12WSD-0011-R2a-SM-5LZWB 60-69 years, female 145.9
GTEX-14BIN-0011-R2a-SM-5S2RJ 50-59 years, female 144.3
GTEX-X4XX-0011-R2A-SM-3P623 60-69 years, male 143.4
GTEX-1LVAO-0011-R2a-SM-EYYX1 60-69 years, male 141.2
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 115.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 115.2
FF:10158-103A5 76 years, female 115.2

MIDBRAIN - Pig RNA-seqi
Average nTPM 49.0
Pig sample Sample description nTPM
Midbrain
nTPM: 47.3
Samples: 4

Max nTPM: 68.2
Min nTPM: 38.8
Sample A Female 68.2
Sample B Female 38.8
Sample C Male 41.2
Sample D Male 40.9
Periaqueductal gray
nTPM: 38.2
Samples: 3

Max nTPM: 43.9
Min nTPM: 33.5
Sample B Female 33.5
Sample C Male 43.9
Sample D Male 37.3
Substantia nigra
nTPM: 44.2
Samples: 4

Max nTPM: 49.3
Min nTPM: 37.6
Sample A Female 49.3
Sample B Female 37.6
Sample C Male 43.0
Sample D Male 46.7
Superior colliculi
nTPM: 49.1
Samples: 4

Max nTPM: 55.4
Min nTPM: 45.8
Sample A Female 55.4
Sample B Female 48.3
Sample C Male 46.7
Sample D Male 45.8

MIDBRAIN - Mouse RNA-seqi
Average nTPM 48.9
Mouse sample Sample description nTPM
Midbrain
nTPM: 48.9
Samples: 4

Max nTPM: 49.7
Min nTPM: 47.6
Sample A Male 49.0
Sample B Male 47.6
Sample C Female 49.4
Sample D Female 49.7

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 0.5
686202 Antisense, RP_040916_01_A10, Mouse strain C57BL/6J (56 days, male) 0.5

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The Human Protein Atlas project is funded
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