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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:70.3 nTPM
HPA:70.3 nTPM
GTEx:67.1 nTPM
FANTOM5:33.3 Scaled Tags Per Million
Pig:4.0 nTPM
Mouse:118.3 nTPM
Allen mouse:4.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB033674Antibody CAB069477
Glial cells MediumNot detected
Neuronal cells MediumLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 70.3
Sample id Sample description nTPM
Hippocampus
nTPM: 67.9
2529 Female, age 94, left hemisphere 71.3
2621 Female, age 67, right hemisphere 69.2
1898 Male, age 80, left hemisphere 69.0
2148 Female, age 91, left hemisphere 67.4
1911 Female, age 85, right hemisphere 65.9
1855 Male, age 76, left hemisphere 64.4
Dentate gyrus
nTPM: 68.2
2530 Female, age 94, left hemisphere 73.1
2528 Male, age 74, both hemispheres 68.4
2010 Male, age 76, both hemispheres 68.0
2246 Female, age 85, both hemispheres 66.8
1927 Female, age 91, both hemispheres 66.4
2531 Female, age 67, both hemispheres 66.4
Entorhinal gyrus
nTPM: 70.3
2764 Male, age 80, right hemisphere 72.1
2117 Female, age 91, right hemisphere 71.9
2613 Female, age 94, left hemisphere 69.9
2686 Male, age 75, right hemisphere 69.9
1938 Female, age 85, left hemisphere 69.5
1787 Male, age 76, left hemisphere 68.3
Hippocampus, CA1
nTPM: 66.7
2749 Male, age 80, left hemisphere 68.7
2527 Male, age 74, both hemispheres 68.1
2082 Female, age 91, right hemisphere 67.0
1873 Female, age 85, both hemispheres 65.6
2045 Male, age 76, both hemispheres 64.1
Hippocampus, CA2
nTPM: 68.0
2437 Female, age 94, left hemisphere 71.4
1963 Male, age 80, left hemisphere 69.8
1892 Male, age 76, both hemispheres 67.3
2249 Male, age 74, both hemispheres 67.0
2113 Female, age 91, right hemisphere 66.4
1940 Female, age 85, left hemisphere 66.0
Hippocampus, CA3
nTPM: 67.3
1867 Male, age 76, both hemispheres 68.1
2137 Male, age 80, left hemisphere 68.0
2861 Female, age 67, both hemispheres 67.8
2620 Female, age 94, left hemisphere 66.9
1891 Female, age 85, both hemispheres 66.8
2436 Male, age 74, both hemispheres 66.5
Parahippocampal cortex
nTPM: 67.4
1990 Female, age 91, right hemisphere 70.2
2532 Female, age 72, left hemisphere 69.3
2692 Male, age 74, both hemispheres 68.2
1850 Male, age 80, both hemispheres 67.8
1933 Female, age 85, both hemispheres 67.8
2622 Female, age 67, right hemisphere 67.0
2018 Male, age 76, both hemispheres 66.5
2245 Female, age 91, both hemispheres 66.4
2250 Female, age 67, right hemisphere 65.7
2693 Female, age 94, both hemispheres 64.7
Perirhinal gyrus
nTPM: 68.0
1794 Male, age 80, right hemisphere 70.3
1847 Female, age 91, left hemisphere 69.0
1841 Female, age 85, right hemisphere 67.3
2521 Female, age 94, right hemisphere 67.0
2848 Male, age 76, right hemisphere 66.6
Subiculum
nTPM: 69.3
1901 Male, age 80, both hemispheres 71.5
1977 Female, age 85, both hemispheres 71.2
2619 Male, age 74, both hemispheres 71.2
2042 Male, age 76, both hemispheres 68.5
2438 Female, age 94, left hemisphere 67.5
2729 Female, age 91, right hemisphere 65.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 67.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 67.1
Samples: 197

Max nTPM: 133.1
Min nTPM: 33.7
Std nTPM: 15.8
Median nTPM: 64.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 133.1
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 126.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 114.0
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 110.0
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 107.1
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 103.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 103.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 100.7
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 99.5
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 97.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 96.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 33.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 33.3
FF:10153-102I9 76 years, female 37.4
FF:10169-103B7 60 years, female 29.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 4.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 4.0
Samples: 4

Max nTPM: 5.4
Min nTPM: 3.1
Sample A Female 5.4
Sample B Female 3.9
Sample C Male 3.6
Sample D Male 3.1
Entorhinal cortex
nTPM: 3.3
Samples: 4

Max nTPM: 3.8
Min nTPM: 2.8
Sample A Female 3.8
Sample B Female 3.7
Sample C Male 2.9
Sample D Male 2.8
Subiculum
nTPM: 3.4
Samples: 4

Max nTPM: 4.6
Min nTPM: 2.8
Sample A Female 4.6
Sample B Female 2.9
Sample C Male 3.3
Sample D Male 2.8
Ventral hippocampus
nTPM: 3.7
Samples: 4

Max nTPM: 4.2
Min nTPM: 2.8
Sample A Female 3.5
Sample B Female 2.8
Sample C Male 4.2
Sample D Male 4.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 118.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 115.9
Samples: 4

Max nTPM: 120.7
Min nTPM: 110.7
Sample A Male 110.7
Sample B Male 120.7
Sample C Female 118.8
Sample D Female 113.4
Hippocampal formation
nTPM: 118.3
Samples: 4

Max nTPM: 126.2
Min nTPM: 110.0
Sample A Male 126.2
Sample B Male 113.2
Sample C Female 110.0
Sample D Female 123.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.9
69526456 Antisense, RP_050419_04_H03, Mouse strain C57BL/6J (56 days, male) 4.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
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