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AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		43.628
RNA expressioni
Consensus:25.5 nTPM
HPA:25.5 nTPM
GTEx:52.3 nTPM
FANTOM5:178.5 Scaled Tags Per Million
Pig:84.6 nTPM
Mouse:157.9 nTPM
Allen mouse:17.8 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA004105
Amygdala mean intensity 43.628
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract 43.499
Basal medial amygdaloid nucleus 28.155
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 43.628
Cortical amygdala 40.365
Central amygdala 30.105
Medial amygdaloid nucleus 29.728

AMYGDALA - HPA Brain RNA-seq
Max nTPM 25.5
Sample id Sample description nTPM
Amygdala
nTPM: 1.8
2517 Female, age 94, left hemisphere 4.5
2814 Male, age 76, right hemisphere 3.3
1987 Female, age 91, left hemisphere 1.5
2514 Male, age 75, right hemisphere 0.0
2695 Female, age 67, right hemisphere 0.0
Basal amygdala
nTPM: 12.9
2243 Female, age 91, right hemisphere 27.2
2685 Female, age 94, left hemisphere 23.1
2110 Male, age 80, left hemisphere 14.0
1955 Male, age 76, both hemispheres 12.1
2827 Female, age 67, right hemisphere 1.0
2609 Male, age 75, right hemisphere 0.0
Central amygdala
nTPM: 4.5
2239 Male, age 80, left hemisphere 18.1
2826 Female, age 94, left hemisphere 4.3
1905 Male, age 76, both hemispheres 0.0
2515 Male, age 75, right hemisphere 0.0
2701 Female, age 91, right hemisphere 0.0
Corticomedial amygdala
nTPM: 16.5
2829 Male, age 80, left hemisphere 30.6
2429 Female, age 94, left hemisphere 18.2
2242 Female, age 91, right hemisphere 17.9
2240 Male, age 76, both hemispheres 16.2
2535 Female, age 67, right hemisphere 16.2
2428 Male, age 75, right hemisphere 0.0
Lateral amygdala
nTPM: 6.9
2534 Female, age 94, left hemisphere 20.8
2256 Male, age 80, left hemisphere 10.5
1883 Male, age 76, both hemispheres 6.2
2255 Female, age 91, right hemisphere 4.2
2516 Male, age 75, right hemisphere 0.0
2830 Female, age 67, right hemisphere 0.0
Stria terminalis, bed nucleus
nTPM: 25.5
2486 Female, age 94, both hemispheres 47.0
1974 Female, age 91, both hemispheres 29.6
2201 Male, age 74, unknown 0.0

AMYGDALA - GTEx RNA-seqi
Average nTPM 52.3
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 52.3
Samples: 152

Max nTPM: 141.9
Min nTPM: 4.3
Std nTPM: 25.0
Median nTPM: 50.6
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 141.9
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 123.0
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 111.7
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 111.2
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 102.4
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 99.7
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 98.7
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 98.5
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 96.9
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 96.4
GTEX-P44H-0011-R4A-SM-2XCEW 40-49 years, male 92.4
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 178.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 178.5
FF:10151-102I7 76 years, female 178.5

AMYGDALA - Pig RNA-seqi
Average nTPM 84.6
Pig sample Sample description nTPM
Amygdala
nTPM: 84.7
Samples: 4

Max nTPM: 128.9
Min nTPM: 55.3
Sample A Female 128.9
Sample B Female 55.3
Sample C Male 60.5
Sample D Male 93.9

AMYGDALA - Mouse RNA-seqi
Average nTPM 157.9
Mouse sample Sample description nTPM
Amygdala
nTPM: 158.0
Samples: 4

Max nTPM: 175.5
Min nTPM: 138.2
Sample A Male 175.5
Sample B Male 158.0
Sample C Female 138.2
Sample D Female 160.1

AMYGDALA - Allen Mouse ISHi
Max Expression energy 17.8
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 17.8
69059954 Antisense, RP_050317_04_G02, Mouse strain C57BL/6J (56 days, male) 17.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.