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AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		3.158
RNA expressioni
Consensus:208.2 nTPM
HPA:208.2 nTPM
GTEx:157.5 nTPM
FANTOM5:738.3 Scaled Tags Per Million
Pig:283.0 nTPM
Mouse:89.5 nTPM
Allen mouse:11.3 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA019123
Amygdala mean intensity 3.158
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract 2.098
Basal medial amygdaloid nucleus 2.087
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 2.515
Cortical amygdala 2.888
Central amygdala 3.158
Medial amygdaloid nucleus -

AMYGDALA - HPA Brain RNA-seq
Max nTPM 208.2
Sample id Sample description nTPM
Amygdala
nTPM: 208.2
2814 Male, age 76, right hemisphere 252.1
2514 Male, age 75, right hemisphere 243.4
2695 Female, age 67, right hemisphere 212.0
2517 Female, age 94, left hemisphere 177.9
1987 Female, age 91, left hemisphere 155.6
Basal amygdala
nTPM: 158.5
2609 Male, age 75, right hemisphere 196.9
1955 Male, age 76, both hemispheres 185.8
2110 Male, age 80, left hemisphere 168.5
2827 Female, age 67, right hemisphere 150.0
2685 Female, age 94, left hemisphere 143.0
2243 Female, age 91, right hemisphere 107.1
Central amygdala
nTPM: 170.6
1905 Male, age 76, both hemispheres 221.3
2239 Male, age 80, left hemisphere 177.6
2701 Female, age 91, right hemisphere 167.1
2826 Female, age 94, left hemisphere 148.6
2515 Male, age 75, right hemisphere 138.3
Corticomedial amygdala
nTPM: 144.0
2428 Male, age 75, right hemisphere 179.8
2240 Male, age 76, both hemispheres 178.9
2429 Female, age 94, left hemisphere 172.0
2829 Male, age 80, left hemisphere 134.4
2242 Female, age 91, right hemisphere 105.8
2535 Female, age 67, right hemisphere 93.1
Lateral amygdala
nTPM: 175.1
2516 Male, age 75, right hemisphere 222.1
1883 Male, age 76, both hemispheres 222.0
2256 Male, age 80, left hemisphere 190.0
2830 Female, age 67, right hemisphere 173.8
2534 Female, age 94, left hemisphere 129.3
2255 Female, age 91, right hemisphere 113.5
Stria terminalis, bed nucleus
nTPM: 91.5
2201 Male, age 74, unknown 119.8
1974 Female, age 91, both hemispheres 87.2
2486 Female, age 94, both hemispheres 67.5

AMYGDALA - GTEx RNA-seqi
Average nTPM 157.5
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 157.5
Samples: 152

Max nTPM: 341.3
Min nTPM: 26.2
Std nTPM: 50.0
Median nTPM: 150.0
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 341.3
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 337.8
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 280.7
GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 275.6
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 261.1
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 260.4
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 245.3
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 242.0
GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 238.1
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 236.6
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 232.8
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 738.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 738.3
FF:10151-102I7 76 years, female 738.3

AMYGDALA - Pig RNA-seqi
Average nTPM 283.0
Pig sample Sample description nTPM
Amygdala
nTPM: 283.1
Samples: 4

Max nTPM: 355.9
Min nTPM: 247.8
Sample A Female 262.8
Sample B Female 355.9
Sample C Male 265.7
Sample D Male 247.8

AMYGDALA - Mouse RNA-seqi
Average nTPM 89.5
Mouse sample Sample description nTPM
Amygdala
nTPM: 89.5
Samples: 4

Max nTPM: 107.3
Min nTPM: 78.1
Sample A Male 78.1
Sample B Male 84.5
Sample C Female 107.3
Sample D Female 88.0

AMYGDALA - Allen Mouse ISHi
Max Expression energy 11.3
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 11.3
1151 Antisense, RP_Baylor_102604, Mouse strain C57BL/6J (56 days, male) 19.0
68797858 Antisense, RP_050215_01_C08, Mouse strain C57BL/6J (56 days, male) 12.6
73635471 Antisense, RP_051130_02_F07, Mouse strain C57BL/6J (56 days, male) 2.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.