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RNF130
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni
Consensus:81.4 nTPM
HPA:81.4 nTPM
GTEx:44.9 nTPM
FANTOM5:115.7 Scaled Tags Per Million
Mouse:57.6 nTPM
Allen mouse:11.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA014499
Glial cells Medium
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 81.4
Sample id Sample description nTPM
Hippocampus
nTPM: 71.8
2529 Female, age 94, left hemisphere 75.8
1898 Male, age 80, left hemisphere 72.7
2621 Female, age 67, right hemisphere 72.1
2148 Female, age 91, left hemisphere 71.7
1911 Female, age 85, right hemisphere 70.0
1855 Male, age 76, left hemisphere 68.4
Dentate gyrus
nTPM: 74.6
2530 Female, age 94, left hemisphere 80.1
2010 Male, age 76, both hemispheres 76.9
2528 Male, age 74, both hemispheres 76.1
2246 Female, age 85, both hemispheres 73.2
2531 Female, age 67, both hemispheres 71.8
1927 Female, age 91, both hemispheres 69.4
Entorhinal gyrus
nTPM: 81.4
2117 Female, age 91, right hemisphere 88.2
1938 Female, age 85, left hemisphere 87.9
2764 Male, age 80, right hemisphere 84.1
2613 Female, age 94, left hemisphere 80.5
1787 Male, age 76, left hemisphere 76.9
2686 Male, age 75, right hemisphere 70.9
Hippocampus, CA1
nTPM: 71.4
2749 Male, age 80, left hemisphere 74.1
1873 Female, age 85, both hemispheres 72.4
2527 Male, age 74, both hemispheres 71.6
2082 Female, age 91, right hemisphere 71.0
2045 Male, age 76, both hemispheres 68.1
Hippocampus, CA2
nTPM: 74.7
1963 Male, age 80, left hemisphere 79.5
2249 Male, age 74, both hemispheres 77.6
1940 Female, age 85, left hemisphere 75.1
2437 Female, age 94, left hemisphere 74.9
2113 Female, age 91, right hemisphere 73.6
1892 Male, age 76, both hemispheres 67.4
Hippocampus, CA3
nTPM: 71.4
1891 Female, age 85, both hemispheres 78.3
2861 Female, age 67, both hemispheres 71.7
2436 Male, age 74, both hemispheres 71.1
1867 Male, age 76, both hemispheres 70.3
2137 Male, age 80, left hemisphere 68.7
2620 Female, age 94, left hemisphere 68.3
Parahippocampal cortex
nTPM: 75.0
1990 Female, age 91, right hemisphere 82.1
1850 Male, age 80, both hemispheres 80.0
2692 Male, age 74, both hemispheres 79.5
1933 Female, age 85, both hemispheres 77.1
2532 Female, age 72, left hemisphere 77.1
2018 Male, age 76, both hemispheres 76.5
2693 Female, age 94, both hemispheres 71.9
2245 Female, age 91, both hemispheres 70.9
2622 Female, age 67, right hemisphere 68.0
2250 Female, age 67, right hemisphere 67.0
Perirhinal gyrus
nTPM: 75.6
1847 Female, age 91, left hemisphere 79.5
1794 Male, age 80, right hemisphere 75.2
2848 Male, age 76, right hemisphere 75.1
1841 Female, age 85, right hemisphere 74.0
2521 Female, age 94, right hemisphere 74.0
Subiculum
nTPM: 79.6
2042 Male, age 76, both hemispheres 84.5
1977 Female, age 85, both hemispheres 84.3
1901 Male, age 80, both hemispheres 80.9
2438 Female, age 94, left hemisphere 78.9
2729 Female, age 91, right hemisphere 75.0
2619 Male, age 74, both hemispheres 74.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 44.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 44.9
Samples: 197

Max nTPM: 130.0
Min nTPM: 14.3
Std nTPM: 22.8
Median nTPM: 39.5
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 130.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 123.1
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 105.7
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 102.0
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 96.8
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 95.8
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 94.6
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 93.4
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 91.4
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 91.1
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 90.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 115.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 115.7
FF:10153-102I9 76 years, female 137.3
FF:10169-103B7 60 years, female 94.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 57.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 57.4
Samples: 4

Max nTPM: 62.1
Min nTPM: 52.0
Sample A Male 60.0
Sample B Male 55.5
Sample C Female 52.0
Sample D Female 62.1
Hippocampal formation
nTPM: 57.7
Samples: 4

Max nTPM: 67.8
Min nTPM: 53.9
Sample A Male 54.9
Sample B Male 54.0
Sample C Female 67.8
Sample D Female 53.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.4
68637868 Antisense, RP_050126_01_G07, Mouse strain C57BL/6J (56 days, male) 11.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.