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AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:38.8 nTPM
HPA:38.8 nTPM
GTEx:11.5 nTPM
FANTOM5:99.1 Scaled Tags Per Million
Pig:28.2 nTPM
Mouse:5.5 nTPM
Allen mouse:1.9 Expression energy

AMYGDALA - Annotated protein expression
Pending normal tissue analysis

AMYGDALA - HPA Brain RNA-seq
Max nTPM 38.8
Sample id Sample description nTPM
Amygdala
nTPM: 38.7
2695 Female, age 67, right hemisphere 49.5
1987 Female, age 91, left hemisphere 42.3
2814 Male, age 76, right hemisphere 41.8
2514 Male, age 75, right hemisphere 33.0
2517 Female, age 94, left hemisphere 26.7
Basal amygdala
nTPM: 25.0
2609 Male, age 75, right hemisphere 41.5
1955 Male, age 76, both hemispheres 30.5
2827 Female, age 67, right hemisphere 22.3
2110 Male, age 80, left hemisphere 22.2
2685 Female, age 94, left hemisphere 18.2
2243 Female, age 91, right hemisphere 15.3
Central amygdala
nTPM: 38.8
2515 Male, age 75, right hemisphere 63.1
1905 Male, age 76, both hemispheres 43.2
2826 Female, age 94, left hemisphere 37.7
2701 Female, age 91, right hemisphere 28.5
2239 Male, age 80, left hemisphere 21.6
Corticomedial amygdala
nTPM: 24.5
2428 Male, age 75, right hemisphere 41.8
2240 Male, age 76, both hemispheres 23.7
2829 Male, age 80, left hemisphere 21.0
2242 Female, age 91, right hemisphere 20.9
2535 Female, age 67, right hemisphere 20.0
2429 Female, age 94, left hemisphere 19.7
Lateral amygdala
nTPM: 32.4
2516 Male, age 75, right hemisphere 49.6
1883 Male, age 76, both hemispheres 34.0
2830 Female, age 67, right hemisphere 34.0
2534 Female, age 94, left hemisphere 28.5
2256 Male, age 80, left hemisphere 26.2
2255 Female, age 91, right hemisphere 22.2
Stria terminalis, bed nucleus
nTPM: 19.8
2201 Male, age 74, unknown 28.5
1974 Female, age 91, both hemispheres 16.3
2486 Female, age 94, both hemispheres 14.5

AMYGDALA - GTEx RNA-seqi
Average nTPM 11.5
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 11.5
Samples: 152

Max nTPM: 21.8
Min nTPM: 4.7
Std nTPM: 3.7
Median nTPM: 11.1
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 21.8
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 21.7
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 21.7
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 21.5
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 21.1
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 20.6
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 20.2
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 19.2
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 19.0
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 17.8
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 17.4
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 99.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 99.1
FF:10151-102I7 76 years, female 99.1

AMYGDALA - Pig RNA-seqi
Average nTPM 28.2
Pig sample Sample description nTPM
Amygdala
nTPM: 28.3
Samples: 4

Max nTPM: 37.6
Min nTPM: 23.7
Sample A Female 24.1
Sample B Female 37.6
Sample C Male 27.6
Sample D Male 23.7

AMYGDALA - Mouse RNA-seqi
Average nTPM 5.5
Mouse sample Sample description nTPM
Amygdala
nTPM: 5.5
Samples: 4

Max nTPM: 6.1
Min nTPM: 4.9
Sample A Male 5.5
Sample B Male 4.9
Sample C Female 5.5
Sample D Female 6.1

AMYGDALA - Allen Mouse ISHi
Max Expression energy 1.9
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 1.9
71016573 Antisense, RP_050725_03_A01, Mouse strain C57BL/6J (56 days, male) 2.2
68631966 Antisense, RP_050125_01_D11, Mouse strain C57BL/6J (56 days, male) 1.6

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.