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AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		114.269
RNA expressioni
Consensus:44.8 nTPM
HPA:44.8 nTPM
GTEx:48.1 nTPM
FANTOM5:80.1 Scaled Tags Per Million
Pig:44.3 nTPM
Mouse:117.4 nTPM
Allen mouse:18.7 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA056940
Amygdala mean intensity 114.269
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract 70.113
Basal medial amygdaloid nucleus 75.610
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 70.121
Cortical amygdala 113.011
Central amygdala 60.652
Medial amygdaloid nucleus 114.269

AMYGDALA - HPA Brain RNA-seq
Max nTPM 44.8
Sample id Sample description nTPM
Amygdala
nTPM: 29.4
1987 Female, age 91, left hemisphere 36.7
2517 Female, age 94, left hemisphere 34.4
2514 Male, age 75, right hemisphere 29.6
2814 Male, age 76, right hemisphere 25.2
2695 Female, age 67, right hemisphere 20.9
Basal amygdala
nTPM: 40.7
2243 Female, age 91, right hemisphere 53.8
2685 Female, age 94, left hemisphere 51.1
2827 Female, age 67, right hemisphere 37.9
2110 Male, age 80, left hemisphere 37.4
2609 Male, age 75, right hemisphere 34.7
1955 Male, age 76, both hemispheres 29.0
Central amygdala
nTPM: 35.6
2239 Male, age 80, left hemisphere 43.8
2826 Female, age 94, left hemisphere 41.4
2515 Male, age 75, right hemisphere 34.4
2701 Female, age 91, right hemisphere 31.7
1905 Male, age 76, both hemispheres 26.8
Corticomedial amygdala
nTPM: 44.8
2242 Female, age 91, right hemisphere 63.0
2535 Female, age 67, right hemisphere 52.2
2829 Male, age 80, left hemisphere 50.2
2429 Female, age 94, left hemisphere 44.7
2428 Male, age 75, right hemisphere 29.9
2240 Male, age 76, both hemispheres 29.0
Lateral amygdala
nTPM: 33.4
2534 Female, age 94, left hemisphere 41.7
2255 Female, age 91, right hemisphere 38.2
2256 Male, age 80, left hemisphere 33.4
2516 Male, age 75, right hemisphere 30.1
1883 Male, age 76, both hemispheres 29.4
2830 Female, age 67, right hemisphere 27.7
Stria terminalis, bed nucleus
nTPM: 42.0
2486 Female, age 94, both hemispheres 47.9
1974 Female, age 91, both hemispheres 41.9
2201 Male, age 74, unknown 36.3

AMYGDALA - GTEx RNA-seqi
Average nTPM 48.1
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 48.1
Samples: 152

Max nTPM: 79.3
Min nTPM: 23.9
Std nTPM: 11.3
Median nTPM: 48.0
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 79.3
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 74.0
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 73.4
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 71.9
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 71.7
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 71.1
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 70.5
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 68.7
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 68.6
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 67.2
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 66.7
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 80.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 80.1
FF:10151-102I7 76 years, female 80.1

AMYGDALA - Pig RNA-seqi
Average nTPM 44.3
Pig sample Sample description nTPM
Amygdala
nTPM: 44.3
Samples: 4

Max nTPM: 66.6
Min nTPM: 27.1
Sample A Female 66.6
Sample B Female 27.1
Sample C Male 41.2
Sample D Male 42.3

AMYGDALA - Mouse RNA-seqi
Average nTPM 117.4
Mouse sample Sample description nTPM
Amygdala
nTPM: 117.4
Samples: 4

Max nTPM: 121.0
Min nTPM: 110.8
Sample A Male 118.0
Sample B Male 121.0
Sample C Female 110.8
Sample D Female 119.8

AMYGDALA - Allen Mouse ISHi
Max Expression energy 18.7
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 18.7
70928198 Antisense, RP_050725_01_B12, Mouse strain C57BL/6J (56 days, male) 19.7
75694702 Antisense, RP_060518_03_H01, Mouse strain C57BL/6J (56 days, male) 17.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.