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NCBP2
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:41.5 nTPM
HPA:41.5 nTPM
GTEx:39.4 nTPM
FANTOM5:102.8 Scaled Tags Per Million
Pig:18.2 nTPM
Mouse:51.0 nTPM
Allen mouse:3.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044850
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 41.5
Sample id Sample description nTPM
Hippocampus
nTPM: 40.3
1898 Male, age 80, left hemisphere 42.0
2148 Female, age 91, left hemisphere 41.6
1911 Female, age 85, right hemisphere 40.5
1855 Male, age 76, left hemisphere 40.3
2529 Female, age 94, left hemisphere 39.4
2621 Female, age 67, right hemisphere 38.2
Dentate gyrus
nTPM: 40.3
2528 Male, age 74, both hemispheres 41.3
1927 Female, age 91, both hemispheres 41.2
2246 Female, age 85, both hemispheres 40.7
2010 Male, age 76, both hemispheres 40.3
2530 Female, age 94, left hemisphere 39.2
2531 Female, age 67, both hemispheres 38.8
Entorhinal gyrus
nTPM: 37.9
2117 Female, age 91, right hemisphere 40.1
1938 Female, age 85, left hemisphere 38.6
1787 Male, age 76, left hemisphere 38.2
2764 Male, age 80, right hemisphere 37.1
2686 Male, age 75, right hemisphere 36.9
2613 Female, age 94, left hemisphere 36.1
Hippocampus, CA1
nTPM: 41.5
1873 Female, age 85, both hemispheres 44.0
2045 Male, age 76, both hemispheres 42.4
2749 Male, age 80, left hemisphere 41.4
2082 Female, age 91, right hemisphere 39.9
2527 Male, age 74, both hemispheres 39.7
Hippocampus, CA2
nTPM: 38.7
1892 Male, age 76, both hemispheres 41.6
2113 Female, age 91, right hemisphere 39.4
2249 Male, age 74, both hemispheres 39.1
1963 Male, age 80, left hemisphere 37.8
1940 Female, age 85, left hemisphere 37.4
2437 Female, age 94, left hemisphere 37.1
Hippocampus, CA3
nTPM: 40.5
2620 Female, age 94, left hemisphere 43.2
2137 Male, age 80, left hemisphere 41.1
1891 Female, age 85, both hemispheres 40.8
1867 Male, age 76, both hemispheres 40.5
2436 Male, age 74, both hemispheres 38.8
2861 Female, age 67, both hemispheres 38.6
Parahippocampal cortex
nTPM: 38.6
1850 Male, age 80, both hemispheres 40.9
2622 Female, age 67, right hemisphere 40.2
2692 Male, age 74, both hemispheres 39.1
2250 Female, age 67, right hemisphere 38.7
2245 Female, age 91, both hemispheres 38.4
2018 Male, age 76, both hemispheres 38.3
1990 Female, age 91, right hemisphere 37.9
1933 Female, age 85, both hemispheres 37.6
2532 Female, age 72, left hemisphere 37.4
2693 Female, age 94, both hemispheres 36.9
Perirhinal gyrus
nTPM: 39.1
1847 Female, age 91, left hemisphere 40.0
2521 Female, age 94, right hemisphere 39.7
1841 Female, age 85, right hemisphere 39.3
2848 Male, age 76, right hemisphere 38.6
1794 Male, age 80, right hemisphere 38.0
Subiculum
nTPM: 38.3
2729 Female, age 91, right hemisphere 40.2
1977 Female, age 85, both hemispheres 38.6
2619 Male, age 74, both hemispheres 38.5
1901 Male, age 80, both hemispheres 38.2
2042 Male, age 76, both hemispheres 37.2
2438 Female, age 94, left hemisphere 37.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 39.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 39.4
Samples: 197

Max nTPM: 66.7
Min nTPM: 22.9
Std nTPM: 7.4
Median nTPM: 38.6
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 66.7
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 66.6
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 58.3
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 58.2
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 57.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 56.2
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 54.8
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 54.3
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 53.9
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 53.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 53.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 102.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 102.8
FF:10169-103B7 60 years, female 126.6
FF:10153-102I9 76 years, female 79.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 18.2
Samples: 4

Max nTPM: 21.0
Min nTPM: 16.8
Sample A Female 21.0
Sample B Female 17.7
Sample C Male 17.1
Sample D Male 16.8
Entorhinal cortex
nTPM: 17.0
Samples: 4

Max nTPM: 19.7
Min nTPM: 14.8
Sample A Female 16.8
Sample B Female 19.7
Sample C Male 16.6
Sample D Male 14.8
Subiculum
nTPM: 18.2
Samples: 4

Max nTPM: 22.1
Min nTPM: 15.2
Sample A Female 22.1
Sample B Female 18.2
Sample C Male 15.2
Sample D Male 17.2
Ventral hippocampus
nTPM: 16.2
Samples: 4

Max nTPM: 17.7
Min nTPM: 14.6
Sample A Female 17.7
Sample B Female 17.0
Sample C Male 14.6
Sample D Male 15.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 51.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 46.1
Samples: 4

Max nTPM: 52.2
Min nTPM: 40.4
Sample A Male 41.7
Sample B Male 52.2
Sample C Female 50.1
Sample D Female 40.4
Hippocampal formation
nTPM: 51.0
Samples: 4

Max nTPM: 54.3
Min nTPM: 46.0
Sample A Male 54.3
Sample B Male 53.2
Sample C Female 46.0
Sample D Female 50.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.7
69782067 Antisense, RP_050505_02_C05, Mouse strain C57BL/6J (56 days, male) 3.7

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The Human Protein Atlas

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