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DHCR24
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:91.3 nTPM
HPA:91.3 nTPM
GTEx:96.0 nTPM
FANTOM5:269.0 Scaled Tags Per Million
Mouse:61.3 nTPM
Allen mouse:5.0 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 91.3
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 71.0
2411 Female, age 72, unknown 100.7
1830 Male, age 51, unknown 93.3
1870 Female, age 42, unknown 92.0
2019 Male, age 18, unknown 76.6
1833 Male, age 53, unknown 71.3
2828 Female, age 72, unknown 68.6
2586 Male, age 75, left hemisphere 60.3
1827 Male, age 72, unknown 58.9
2666 Male, age 74, left hemisphere 44.8
2219 Male, age 76, both hemispheres 43.1
Dorsal raphe nucleus
nTPM: 65.0
2750 Male, age 76, both hemispheres 118.2
2047 Male, age 72, unknown 61.0
1828 Male, age 53, unknown 54.4
2298 Female, age 72, unknown 52.5
2016 Female, age 72, unknown 38.7
Inferior colliculus
nTPM: 43.5
1848 Female, age 42, unknown 56.8
1890 Male, age 53, unknown 45.3
2849 Male, age 72, unknown 41.0
2097 Female, age 72, unknown 31.0
Median raphe nucleus
nTPM: 91.3
2220 Male, age 76, midline 91.3
Pedunculopontine tegmental nucleus
nTPM: 74.8
2334 Male, age 80, both hemispheres 92.8
1921 Female, age 85, both hemispheres 75.7
2338 Male, age 61, both hemispheres 55.7
Periaquaductal grey, anterior
nTPM: 71.9
2502 Female, age 75, unknown 129.1
1947 Male, age 18, unknown 47.9
1795 Male, age 51, unknown 38.7
Periaquaductal grey, dorsal
nTPM: 38.9
2850 Male, age 76, both hemispheres 45.1
2464 Female, age 72, unknown 44.8
1831 Male, age 72, unknown 35.8
1840 Male, age 53, unknown 30.0
Periaquaductal grey, lateral
nTPM: 49.4
2053 Male, age 18, unknown 52.2
2272 Male, age 74, both hemispheres 52.2
2140 Male, age 76, both hemispheres 43.8
Pretectal area
nTPM: 54.6
2667 Female, age 75, unknown 66.4
2825 Male, age 18, unknown 62.7
2007 Male, age 72, unknown 61.1
1815 Male, age 53, unknown 60.5
1817 Female, age 42, unknown 58.8
1816 Male, age 51, unknown 56.8
2273 Male, age 74, both hemispheres 54.7
2407 Male, age 75, both hemispheres 52.0
1944 Female, age 72, unknown 45.7
2316 Male, age 76, right hemisphere 45.0
2224 Female, age 72, unknown 36.2
Red nucleus
nTPM: 89.0
1865 Male, age 51, unknown 117.0
2588 Male, age 74, left hemisphere 113.0
1821 Female, age 72, unknown 98.3
2769 Male, age 72, unknown 93.9
2227 Male, age 72, unknown 92.4
2725 Female, age 75, unknown 91.7
1904 Male, age 53, unknown 81.8
1954 Female, age 42, unknown 81.6
2785 Male, age 18, unknown 81.2
2584 Male, age 75, left hemisphere 73.5
2823 Male, age 76, right hemisphere 73.1
2503 Female, age 72, unknown 70.8
Substantia nigra
nTPM: 47.8
1941 Male, age 53, unknown 76.6
1889 Female, age 72, unknown 66.4
1916 Female, age 42, unknown 62.9
1851 Male, age 51, unknown 53.1
2583 Male, age 75, right hemisphere 52.7
2241 Male, age 72, unknown 49.4
2699 Male, age 18, unknown 36.8
2665 Male, age 74, both hemispheres 30.7
2409 Female, age 72, unknown 29.5
2590 Female, age 75, unknown 19.7
Superior colliculus
nTPM: 58.6
2587 Male, age 74, left hemisphere 83.8
2261 Male, age 18, unknown 71.2
1913 Female, age 42, unknown 67.1
1839 Male, age 51, unknown 57.8
2087 Female, age 72, unknown 55.4
1895 Male, age 76, right hemisphere 53.2
1995 Male, age 72, unknown 52.5
2664 Male, age 75, both hemispheres 50.1
1796 Male, age 53, unknown 48.4
2668 Female, age 75, unknown 46.1
Ventral tegmental area
nTPM: 76.0
2223 Female, age 72, unknown 152.9
2410 Female, age 72, unknown 81.1
2218 Male, age 76, both hemispheres 68.1
2021 Male, age 53, unknown 59.0
1942 Male, age 51, unknown 48.5
1915 Female, age 42, unknown 46.3

MIDBRAIN - GTEx RNA-seqi
Average nTPM 96.0
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 96.0
Samples: 139

Max nTPM: 754.4
Min nTPM: 11.0
Std nTPM: 83.2
Median nTPM: 76.0
GTEX-X4XX-0011-R2A-SM-3P623 60-69 years, male 754.4
GTEX-P44G-0011-R2A-SM-2XCD2 30-39 years, male 325.5
GTEX-N7MS-0011-R2a-SM-2HML6 60-69 years, male 321.1
GTEX-ZE9C-0011-R2a-SM-4WKGH 60-69 years, male 290.3
GTEX-NPJ7-0011-R2a-SM-2I3GF 60-69 years, female 273.4
GTEX-11DZ1-0011-R2a-SM-DNZZM 50-59 years, male 240.6
GTEX-Q2AG-0011-R2A-SM-2HMIT 40-49 years, female 231.6
GTEX-13X6I-0011-R2b-SM-5PNWQ 60-69 years, male 228.3
GTEX-UTHO-0011-R2A-SM-3GIKC 60-69 years, male 224.9
GTEX-15CHQ-0011-R2b-SM-6AJAD 60-69 years, male 222.7
GTEX-1A8G7-0011-R2a-SM-7IGQI 60-69 years, male 205.5
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 269.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 269.0
FF:10158-103A5 76 years, female 269.0

MIDBRAIN - Mouse RNA-seqi
Average nTPM 61.3
Mouse sample Sample description nTPM
Midbrain
nTPM: 61.3
Samples: 4

Max nTPM: 67.3
Min nTPM: 57.7
Sample A Male 57.7
Sample B Male 59.1
Sample C Female 61.2
Sample D Female 67.3

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 5.0
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 5.0
71016721 Antisense, RP_050808_02_A09, Mouse strain C57BL/6J (56 days, male) 6.7
671229 Antisense, RP_040914_01_H04, Mouse strain C57BL/6J (56 days, male) 3.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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