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IFI27L2
BASAL GANGLIA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:157.0 nTPM
HPA:157.0 nTPM
GTEx:111.2 nTPM
FANTOM5:65.5 Scaled Tags Per Million

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 157.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 142.6
2481 Female, age 94, left hemisphere 154.6
2288 Male, age 75, left hemisphere 142.8
1781 Male, age 74, unknown 141.9
1854 Male, age 80, left hemisphere 141.2
1857 Female, age 85, left hemisphere 141.2
2846 Female, age 79, unknown 141.1
2290 Female, age 72, unknown 139.6
2289 Male, age 61, right hemisphere 138.2
Claustrum
nTPM: 141.2
2198 Male, age 80, both hemispheres 147.2
1956 Male, age 74, unknown 143.7
2491 Male, age 75, both hemispheres 142.2
2196 Female, age 79, unknown 141.8
2284 Female, age 91, both hemispheres 141.5
2292 Female, age 85, both hemispheres 141.4
2568 Male, age 61, both hemispheres 139.8
2392 Female, age 94, both hemispheres 139.1
2645 Female, age 72, unknown 134.2
Globus pallidus, externus
nTPM: 157.0
2772 Female, age 79, unknown 166.7
1996 Male, age 80, right hemisphere 164.6
2646 Male, age 61, right hemisphere 161.8
2395 Male, age 75, both hemispheres 151.9
2567 Female, age 72, unknown 140.1
Globus pallidus, internus
nTPM: 154.4
2037 Male, age 80, right hemisphere 159.1
1818 Male, age 74, unknown 158.2
2483 Female, age 94, right hemisphere 157.8
2778 Female, age 91, both hemispheres 156.4
2287 Male, age 75, right hemisphere 156.0
2111 Female, age 85, right hemisphere 147.0
2566 Female, age 72, unknown 146.0
Nucleus accumbens
nTPM: 143.5
2286 Male, age 75, left hemisphere 148.7
2732 Male, age 80, right hemisphere 146.4
2698 Female, age 72, unknown 146.0
2391 Female, age 94, left hemisphere 144.9
1856 Female, age 91, right hemisphere 144.4
1806 Female, age 85, left hemisphere 143.0
1783 Male, age 74, unknown 137.5
2824 Male, age 61, right hemisphere 137.4
Nucleus basalis of Meynert
nTPM: 147.1
2569 Male, age 61, both hemispheres 161.7
2821 Male, age 75, both hemispheres 143.8
2484 Female, age 94, left hemisphere 141.8
2393 Male, age 80, right hemisphere 141.3
Nucleus of the diagonal band
nTPM: 145.4
1812 Female, age 91, both hemispheres 156.6
2775 Male, age 80, right hemisphere 145.8
1979 Male, age 74, unknown 142.8
2195 Female, age 85, both hemispheres 141.6
2029 Male, age 61, right hemisphere 140.2
Olfactory tubercle
nTPM: 142.2
1846 Male, age 80, right hemisphere 146.2
2856 Male, age 75, right hemisphere 144.1
1998 Female, age 91, both hemispheres 143.5
2487 Female, age 94, left hemisphere 134.8
Putamen
nTPM: 139.4
2482 Female, age 94, left hemisphere 147.5
2647 Male, age 75, left hemisphere 140.9
1937 Female, age 91, right hemisphere 140.3
2466 Female, age 79, unknown 138.5
2489 Female, age 72, unknown 138.5
1838 Male, age 80, right hemisphere 135.2
1829 Male, age 74, unknown 134.5
Septal nuclei
nTPM: 143.6
1960 Male, age 74, unknown 146.9
2009 Female, age 91, both hemispheres 146.7
2199 Male, age 80, right hemisphere 145.9
2031 Female, age 72, unknown 144.7
2394 Male, age 61, left hemisphere 143.5
2059 Female, age 85, both hemispheres 141.8
2629 Female, age 94, right hemisphere 135.5

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 111.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 94.3
Samples: 246

Max nTPM: 294.7
Min nTPM: 20.5
Std nTPM: 41.0
Median nTPM: 85.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 294.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 248.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 234.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 217.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 214.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 213.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 189.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 188.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 186.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 185.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 180.0
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 111.2
Samples: 246

Max nTPM: 540.5
Min nTPM: 27.9
Std nTPM: 52.0
Median nTPM: 102.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 540.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 270.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 256.7
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 232.5
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 226.6
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 224.3
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 220.0
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 216.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 202.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 201.8
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 201.4
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Brain - Putamen (basal ganglia)
Average nTPM: 108.8
Samples: 205

Max nTPM: 420.6
Min nTPM: 27.4
Std nTPM: 50.9
Median nTPM: 95.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 420.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 267.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 255.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 251.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 247.5
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 243.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 239.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 237.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 228.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 221.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 204.3
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 65.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 41.2
FF:10164-103B2 76 years, female 41.2
Globus pallidus
Scaled Tags Per Million: 65.5
FF:10175-103C4 60 years, female 80.5
FF:10161-103A8 76 years, female 50.5
Nucleus accumbens
Scaled Tags Per Million: 33.4
FF:10037-101F1 23-56 years, mixed 33.4
Putamen
Scaled Tags Per Million: 40.9
FF:10176-103C5 60 years, female 40.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.