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GJB6
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:50.2 nTPM
HPA:50.2 nTPM
GTEx:26.6 nTPM
FANTOM5:52.2 Scaled Tags Per Million
Pig:12.9 nTPM
Mouse:68.0 nTPM
Allen mouse:1.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 50.2
Sample id Sample description nTPM
Hippocampus
nTPM: 48.7
2148 Female, age 91, left hemisphere 53.6
1911 Female, age 85, right hemisphere 49.9
2529 Female, age 94, left hemisphere 48.7
1898 Male, age 80, left hemisphere 47.6
1855 Male, age 76, left hemisphere 46.9
2621 Female, age 67, right hemisphere 45.2
Dentate gyrus
nTPM: 43.6
2528 Male, age 74, both hemispheres 50.5
1927 Female, age 91, both hemispheres 48.0
2246 Female, age 85, both hemispheres 47.0
2531 Female, age 67, both hemispheres 39.9
2530 Female, age 94, left hemisphere 38.4
2010 Male, age 76, both hemispheres 37.7
Entorhinal gyrus
nTPM: 45.6
1938 Female, age 85, left hemisphere 53.9
2117 Female, age 91, right hemisphere 47.0
2764 Male, age 80, right hemisphere 45.2
1787 Male, age 76, left hemisphere 42.7
2613 Female, age 94, left hemisphere 42.7
2686 Male, age 75, right hemisphere 42.1
Hippocampus, CA1
nTPM: 47.7
2527 Male, age 74, both hemispheres 60.1
1873 Female, age 85, both hemispheres 49.8
2082 Female, age 91, right hemisphere 45.1
2749 Male, age 80, left hemisphere 42.7
2045 Male, age 76, both hemispheres 40.6
Hippocampus, CA2
nTPM: 45.6
2249 Male, age 74, both hemispheres 52.4
2113 Female, age 91, right hemisphere 47.4
2437 Female, age 94, left hemisphere 46.2
1892 Male, age 76, both hemispheres 43.9
1940 Female, age 85, left hemisphere 42.2
1963 Male, age 80, left hemisphere 41.8
Hippocampus, CA3
nTPM: 45.2
2436 Male, age 74, both hemispheres 53.1
1891 Female, age 85, both hemispheres 47.2
2861 Female, age 67, both hemispheres 44.5
1867 Male, age 76, both hemispheres 43.3
2620 Female, age 94, left hemisphere 42.4
2137 Male, age 80, left hemisphere 40.8
Parahippocampal cortex
nTPM: 50.2
1933 Female, age 85, both hemispheres 57.3
2692 Male, age 74, both hemispheres 56.7
2622 Female, age 67, right hemisphere 55.6
2250 Female, age 67, right hemisphere 53.6
1990 Female, age 91, right hemisphere 49.7
2693 Female, age 94, both hemispheres 48.3
1850 Male, age 80, both hemispheres 48.2
2245 Female, age 91, both hemispheres 46.7
2532 Female, age 72, left hemisphere 45.5
2018 Male, age 76, both hemispheres 40.2
Perirhinal gyrus
nTPM: 50.0
1794 Male, age 80, right hemisphere 56.6
1841 Female, age 85, right hemisphere 53.6
1847 Female, age 91, left hemisphere 53.3
2521 Female, age 94, right hemisphere 45.3
2848 Male, age 76, right hemisphere 41.4
Subiculum
nTPM: 48.3
2619 Male, age 74, both hemispheres 62.0
2729 Female, age 91, right hemisphere 55.8
2438 Female, age 94, left hemisphere 47.4
1977 Female, age 85, both hemispheres 47.3
1901 Male, age 80, both hemispheres 40.3
2042 Male, age 76, both hemispheres 37.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 26.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 26.6
Samples: 197

Max nTPM: 100.3
Min nTPM: 0.3
Std nTPM: 20.1
Median nTPM: 21.8
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 100.3
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 97.0
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 96.8
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 91.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 88.0
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 78.2
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 73.4
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 72.3
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 68.5
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 68.3
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 67.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 52.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 52.2
FF:10153-102I9 76 years, female 73.1
FF:10169-103B7 60 years, female 31.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 12.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 8.1
Samples: 4

Max nTPM: 12.7
Min nTPM: 5.8
Sample A Female 12.7
Sample B Female 7.3
Sample C Male 5.8
Sample D Male 6.5
Entorhinal cortex
nTPM: 12.9
Samples: 4

Max nTPM: 20.4
Min nTPM: 8.7
Sample A Female 13.6
Sample B Female 20.4
Sample C Male 8.7
Sample D Male 8.9
Subiculum
nTPM: 7.6
Samples: 4

Max nTPM: 12.7
Min nTPM: 3.9
Sample A Female 12.7
Sample B Female 3.9
Sample C Male 4.3
Sample D Male 9.4
Ventral hippocampus
nTPM: 7.2
Samples: 4

Max nTPM: 10.0
Min nTPM: 4.9
Sample A Female 8.4
Sample B Female 4.9
Sample C Male 5.3
Sample D Male 10.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 68.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 68.0
Samples: 4

Max nTPM: 87.3
Min nTPM: 56.9
Sample A Male 59.0
Sample B Male 56.9
Sample C Female 87.3
Sample D Female 68.6
Hippocampal formation
nTPM: 51.5
Samples: 4

Max nTPM: 60.8
Min nTPM: 36.9
Sample A Male 52.0
Sample B Male 36.9
Sample C Female 56.3
Sample D Female 60.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.9
2262 Antisense, RP_040420_01_F08, Mouse strain C57BL/6J (56 days, male) 1.9
2261 Antisense, RP_040420_01_F08, Mouse strain C57BL/6J (56 days, male) 1.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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