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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:12.1 nTPM
HPA:12.1 nTPM
GTEx:11.6 nTPM
FANTOM5:111.6 Scaled Tags Per Million
Pig:30.4 nTPM
Mouse:45.4 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA074880
Glial cells Low
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.1
Sample id Sample description nTPM
Hippocampus
nTPM: 11.0
1898 Male, age 80, left hemisphere 12.1
1855 Male, age 76, left hemisphere 11.1
1911 Female, age 85, right hemisphere 11.1
2621 Female, age 67, right hemisphere 10.9
2529 Female, age 94, left hemisphere 10.6
2148 Female, age 91, left hemisphere 10.4
Dentate gyrus
nTPM: 11.6
2010 Male, age 76, both hemispheres 13.1
1927 Female, age 91, both hemispheres 11.7
2246 Female, age 85, both hemispheres 11.6
2531 Female, age 67, both hemispheres 11.5
2530 Female, age 94, left hemisphere 11.0
2528 Male, age 74, both hemispheres 10.9
Entorhinal gyrus
nTPM: 10.0
1938 Female, age 85, left hemisphere 11.6
2117 Female, age 91, right hemisphere 10.7
2764 Male, age 80, right hemisphere 10.5
2686 Male, age 75, right hemisphere 9.3
1787 Male, age 76, left hemisphere 9.2
2613 Female, age 94, left hemisphere 8.8
Hippocampus, CA1
nTPM: 12.1
2749 Male, age 80, left hemisphere 14.8
2527 Male, age 74, both hemispheres 12.9
1873 Female, age 85, both hemispheres 11.9
2045 Male, age 76, both hemispheres 10.7
2082 Female, age 91, right hemisphere 10.0
Hippocampus, CA2
nTPM: 10.9
1963 Male, age 80, left hemisphere 14.0
1892 Male, age 76, both hemispheres 11.8
2249 Male, age 74, both hemispheres 10.7
1940 Female, age 85, left hemisphere 10.0
2113 Female, age 91, right hemisphere 9.9
2437 Female, age 94, left hemisphere 8.8
Hippocampus, CA3
nTPM: 11.5
2137 Male, age 80, left hemisphere 15.7
1891 Female, age 85, both hemispheres 11.5
2620 Female, age 94, left hemisphere 11.4
1867 Male, age 76, both hemispheres 11.2
2436 Male, age 74, both hemispheres 10.2
2861 Female, age 67, both hemispheres 9.1
Parahippocampal cortex
nTPM: 10.6
1850 Male, age 80, both hemispheres 11.7
1990 Female, age 91, right hemisphere 11.7
2250 Female, age 67, right hemisphere 11.2
1933 Female, age 85, both hemispheres 11.0
2018 Male, age 76, both hemispheres 11.0
2532 Female, age 72, left hemisphere 10.9
2245 Female, age 91, both hemispheres 10.3
2692 Male, age 74, both hemispheres 10.3
2693 Female, age 94, both hemispheres 10.3
2622 Female, age 67, right hemisphere 8.0
Perirhinal gyrus
nTPM: 11.6
2521 Female, age 94, right hemisphere 12.8
1841 Female, age 85, right hemisphere 12.7
2848 Male, age 76, right hemisphere 11.4
1794 Male, age 80, right hemisphere 11.0
1847 Female, age 91, left hemisphere 10.1
Subiculum
nTPM: 11.0
1977 Female, age 85, both hemispheres 11.9
2438 Female, age 94, left hemisphere 11.5
2729 Female, age 91, right hemisphere 11.3
1901 Male, age 80, both hemispheres 11.2
2042 Male, age 76, both hemispheres 10.3
2619 Male, age 74, both hemispheres 9.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.6
Samples: 197

Max nTPM: 20.7
Min nTPM: 6.8
Std nTPM: 2.6
Median nTPM: 11.1
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 20.7
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 20.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 20.0
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 18.9
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 18.2
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 17.9
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 17.6
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 17.0
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 16.9
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 16.5
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 16.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 111.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 111.6
FF:10169-103B7 60 years, female 128.7
FF:10153-102I9 76 years, female 94.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 30.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 30.4
Samples: 4

Max nTPM: 35.4
Min nTPM: 25.3
Sample A Female 35.4
Sample B Female 31.8
Sample C Male 29.1
Sample D Male 25.3
Entorhinal cortex
nTPM: 25.7
Samples: 4

Max nTPM: 28.9
Min nTPM: 23.0
Sample A Female 26.3
Sample B Female 28.9
Sample C Male 24.4
Sample D Male 23.0
Subiculum
nTPM: 27.3
Samples: 4

Max nTPM: 31.3
Min nTPM: 24.3
Sample A Female 31.3
Sample B Female 27.0
Sample C Male 24.3
Sample D Male 26.6
Ventral hippocampus
nTPM: 27.7
Samples: 4

Max nTPM: 32.0
Min nTPM: 23.7
Sample A Female 32.0
Sample B Female 26.2
Sample C Male 23.7
Sample D Male 29.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 45.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 45.4
Samples: 4

Max nTPM: 47.7
Min nTPM: 41.7
Sample A Male 41.7
Sample B Male 46.6
Sample C Female 45.6
Sample D Female 47.7
Hippocampal formation
nTPM: 44.2
Samples: 4

Max nTPM: 52.6
Min nTPM: 40.5
Sample A Male 52.6
Sample B Male 43.1
Sample C Female 40.7
Sample D Female 40.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
71723827 Antisense, RP_050921_01_A03, Mouse strain C57BL/6J (56 days, male) 0.2

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The Human Protein Atlas

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