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FYTTD1
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:13.9 nTPM
HPA:13.9 nTPM
GTEx:12.2 nTPM
FANTOM5:89.7 Scaled Tags Per Million
Pig:31.1 nTPM
Mouse:54.7 nTPM
Allen mouse:0.2 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 13.9
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 10.5
1870 Female, age 42, unknown 12.3
2411 Female, age 72, unknown 11.6
1830 Male, age 51, unknown 10.9
2219 Male, age 76, both hemispheres 10.9
1833 Male, age 53, unknown 10.6
1827 Male, age 72, unknown 10.5
2828 Female, age 72, unknown 10.2
2019 Male, age 18, unknown 9.5
2586 Male, age 75, left hemisphere 9.5
2666 Male, age 74, left hemisphere 8.8
Dorsal raphe nucleus
nTPM: 10.4
2298 Female, age 72, unknown 11.6
2750 Male, age 76, both hemispheres 11.2
2047 Male, age 72, unknown 11.0
1828 Male, age 53, unknown 9.7
2016 Female, age 72, unknown 8.7
Inferior colliculus
nTPM: 10.8
2097 Female, age 72, unknown 11.1
1848 Female, age 42, unknown 10.8
1890 Male, age 53, unknown 10.6
2849 Male, age 72, unknown 10.6
Median raphe nucleus
nTPM: 13.9
2220 Male, age 76, midline 13.9
Pedunculopontine tegmental nucleus
nTPM: 11.5
2334 Male, age 80, both hemispheres 12.1
1921 Female, age 85, both hemispheres 11.6
2338 Male, age 61, both hemispheres 10.9
Periaquaductal grey, anterior
nTPM: 12.1
1947 Male, age 18, unknown 12.8
2502 Female, age 75, unknown 12.4
1795 Male, age 51, unknown 11.1
Periaquaductal grey, dorsal
nTPM: 11.0
1840 Male, age 53, unknown 12.3
2850 Male, age 76, both hemispheres 12.2
2464 Female, age 72, unknown 10.1
1831 Male, age 72, unknown 9.4
Periaquaductal grey, lateral
nTPM: 10.2
2140 Male, age 76, both hemispheres 10.7
2272 Male, age 74, both hemispheres 10.6
2053 Male, age 18, unknown 9.2
Pretectal area
nTPM: 10.7
2224 Female, age 72, unknown 12.3
2825 Male, age 18, unknown 11.8
2273 Male, age 74, both hemispheres 11.4
2407 Male, age 75, both hemispheres 10.9
2316 Male, age 76, right hemisphere 10.7
2007 Male, age 72, unknown 10.6
1944 Female, age 72, unknown 10.2
1816 Male, age 51, unknown 10.1
1817 Female, age 42, unknown 10.1
1815 Male, age 53, unknown 9.8
2667 Female, age 75, unknown 9.8
Red nucleus
nTPM: 10.5
2725 Female, age 75, unknown 12.0
1865 Male, age 51, unknown 11.6
1904 Male, age 53, unknown 11.4
1821 Female, age 72, unknown 11.1
2227 Male, age 72, unknown 11.0
2503 Female, age 72, unknown 11.0
1954 Female, age 42, unknown 10.9
2769 Male, age 72, unknown 10.8
2823 Male, age 76, right hemisphere 9.7
2584 Male, age 75, left hemisphere 9.2
2785 Male, age 18, unknown 9.1
2588 Male, age 74, left hemisphere 8.4
Substantia nigra
nTPM: 12.1
2241 Male, age 72, unknown 14.2
1916 Female, age 42, unknown 13.9
1851 Male, age 51, unknown 12.8
2699 Male, age 18, unknown 12.5
1941 Male, age 53, unknown 12.2
2409 Female, age 72, unknown 11.6
1889 Female, age 72, unknown 11.4
2590 Female, age 75, unknown 11.3
2665 Male, age 74, both hemispheres 11.1
2583 Male, age 75, right hemisphere 9.9
Superior colliculus
nTPM: 10.3
2261 Male, age 18, unknown 11.6
1895 Male, age 76, right hemisphere 10.6
2587 Male, age 74, left hemisphere 10.6
2664 Male, age 75, both hemispheres 10.5
1913 Female, age 42, unknown 10.4
1796 Male, age 53, unknown 10.2
2668 Female, age 75, unknown 10.1
1839 Male, age 51, unknown 9.9
2087 Female, age 72, unknown 9.9
1995 Male, age 72, unknown 8.9
Ventral tegmental area
nTPM: 11.6
1915 Female, age 42, unknown 12.8
2218 Male, age 76, both hemispheres 12.2
2410 Female, age 72, unknown 11.3
2223 Female, age 72, unknown 11.2
1942 Male, age 51, unknown 11.1
2021 Male, age 53, unknown 10.9

MIDBRAIN - GTEx RNA-seqi
Average nTPM 12.2
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 12.2
Samples: 139

Max nTPM: 20.6
Min nTPM: 7.4
Std nTPM: 2.6
Median nTPM: 11.6
GTEX-11TUW-0011-R2b-SM-DO92T 60-69 years, male 20.6
GTEX-Q2AG-0011-R2A-SM-2HMIT 40-49 years, female 19.8
GTEX-QDT8-0011-R2A-SM-32PKQ 30-39 years, female 19.7
GTEX-T2IS-0011-R2A-SM-32QPF 20-29 years, female 19.2
GTEX-13NYB-0011-R2a-SM-5MR3C 40-49 years, male 17.5
GTEX-X4XX-0011-R2A-SM-3P623 60-69 years, male 17.4
GTEX-UTHO-0011-R2A-SM-3GIKC 60-69 years, male 17.2
GTEX-ZAB4-0011-R2a-SM-4RGNP 40-49 years, male 16.7
GTEX-1H1DG-0011-R2a-SM-ADEIQ 70-79 years, male 16.7
GTEX-1GN1U-0011-R2a-SM-CL53A 50-59 years, female 16.3
GTEX-YFC4-0011-R2a-SM-4V6DZ 40-49 years, female 16.0
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 89.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 89.7
FF:10158-103A5 76 years, female 89.7

MIDBRAIN - Pig RNA-seqi
Average nTPM 31.1
Pig sample Sample description nTPM
Midbrain
nTPM: 31.1
Samples: 4

Max nTPM: 31.7
Min nTPM: 30.3
Sample A Female 31.7
Sample B Female 30.8
Sample C Male 30.3
Sample D Male 31.5
Periaqueductal gray
nTPM: 26.9
Samples: 3

Max nTPM: 27.3
Min nTPM: 26.3
Sample B Female 26.3
Sample C Male 27.3
Sample D Male 27.1
Substantia nigra
nTPM: 29.0
Samples: 4

Max nTPM: 33.6
Min nTPM: 24.4
Sample A Female 33.6
Sample B Female 28.7
Sample C Male 29.3
Sample D Male 24.4
Superior colliculi
nTPM: 29.6
Samples: 4

Max nTPM: 32.5
Min nTPM: 25.5
Sample A Female 31.5
Sample B Female 25.5
Sample C Male 32.5
Sample D Male 28.9

MIDBRAIN - Mouse RNA-seqi
Average nTPM 54.7
Mouse sample Sample description nTPM
Midbrain
nTPM: 54.8
Samples: 4

Max nTPM: 57.7
Min nTPM: 50.5
Sample A Male 56.0
Sample B Male 57.7
Sample C Female 54.8
Sample D Female 50.5

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 0.2
71723827 Antisense, RP_050921_01_A03, Mouse strain C57BL/6J (56 days, male) 0.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.