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NAA60
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:31.9 nTPM
HPA:31.9 nTPM
GTEx:37.5 nTPM
FANTOM5:81.7 Scaled Tags Per Million
Pig:25.8 nTPM
Mouse:93.0 nTPM
Allen mouse:2.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040916
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 31.9
Sample id Sample description nTPM
Hippocampus
nTPM: 29.8
2148 Female, age 91, left hemisphere 31.4
1855 Male, age 76, left hemisphere 29.8
1911 Female, age 85, right hemisphere 29.7
2621 Female, age 67, right hemisphere 29.6
1898 Male, age 80, left hemisphere 29.4
2529 Female, age 94, left hemisphere 29.1
Dentate gyrus
nTPM: 30.5
2531 Female, age 67, both hemispheres 35.2
1927 Female, age 91, both hemispheres 31.0
2246 Female, age 85, both hemispheres 29.9
2530 Female, age 94, left hemisphere 29.9
2528 Male, age 74, both hemispheres 29.0
2010 Male, age 76, both hemispheres 28.3
Entorhinal gyrus
nTPM: 27.9
2613 Female, age 94, left hemisphere 29.2
2686 Male, age 75, right hemisphere 28.8
1787 Male, age 76, left hemisphere 28.6
2764 Male, age 80, right hemisphere 28.1
2117 Female, age 91, right hemisphere 27.2
1938 Female, age 85, left hemisphere 25.5
Hippocampus, CA1
nTPM: 30.4
2749 Male, age 80, left hemisphere 34.0
2045 Male, age 76, both hemispheres 32.4
2082 Female, age 91, right hemisphere 28.7
1873 Female, age 85, both hemispheres 28.5
2527 Male, age 74, both hemispheres 28.4
Hippocampus, CA2
nTPM: 28.2
1963 Male, age 80, left hemisphere 31.2
1892 Male, age 76, both hemispheres 28.9
2437 Female, age 94, left hemisphere 28.9
2113 Female, age 91, right hemisphere 27.3
1940 Female, age 85, left hemisphere 26.9
2249 Male, age 74, both hemispheres 25.8
Hippocampus, CA3
nTPM: 31.9
2861 Female, age 67, both hemispheres 38.3
2620 Female, age 94, left hemisphere 38.1
2137 Male, age 80, left hemisphere 34.7
1867 Male, age 76, both hemispheres 29.2
1891 Female, age 85, both hemispheres 26.8
2436 Male, age 74, both hemispheres 24.2
Parahippocampal cortex
nTPM: 26.8
2622 Female, age 67, right hemisphere 29.9
2693 Female, age 94, both hemispheres 27.6
2018 Male, age 76, both hemispheres 27.5
2692 Male, age 74, both hemispheres 27.2
2245 Female, age 91, both hemispheres 26.8
2250 Female, age 67, right hemisphere 26.8
1990 Female, age 91, right hemisphere 26.5
2532 Female, age 72, left hemisphere 25.9
1850 Male, age 80, both hemispheres 25.2
1933 Female, age 85, both hemispheres 24.9
Perirhinal gyrus
nTPM: 26.7
2521 Female, age 94, right hemisphere 28.5
1794 Male, age 80, right hemisphere 27.1
2848 Male, age 76, right hemisphere 26.5
1847 Female, age 91, left hemisphere 26.4
1841 Female, age 85, right hemisphere 24.8
Subiculum
nTPM: 27.4
2619 Male, age 74, both hemispheres 30.2
2729 Female, age 91, right hemisphere 29.1
1901 Male, age 80, both hemispheres 28.6
2042 Male, age 76, both hemispheres 26.9
1977 Female, age 85, both hemispheres 26.3
2438 Female, age 94, left hemisphere 23.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 37.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 37.5
Samples: 197

Max nTPM: 77.5
Min nTPM: 16.9
Std nTPM: 8.3
Median nTPM: 36.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 77.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 61.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 57.7
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 56.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 55.7
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 55.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 53.8
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 53.2
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 52.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 52.4
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 50.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 81.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 81.7
FF:10169-103B7 60 years, female 93.1
FF:10153-102I9 76 years, female 70.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 25.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 21.9
Samples: 4

Max nTPM: 25.7
Min nTPM: 18.8
Sample A Female 25.7
Sample B Female 22.2
Sample C Male 20.8
Sample D Male 18.8
Entorhinal cortex
nTPM: 25.8
Samples: 4

Max nTPM: 28.3
Min nTPM: 22.8
Sample A Female 28.3
Sample B Female 24.1
Sample C Male 27.9
Sample D Male 22.8
Subiculum
nTPM: 22.0
Samples: 4

Max nTPM: 27.5
Min nTPM: 19.5
Sample A Female 27.5
Sample B Female 19.6
Sample C Male 21.3
Sample D Male 19.5
Ventral hippocampus
nTPM: 21.9
Samples: 4

Max nTPM: 28.4
Min nTPM: 16.3
Sample A Female 20.3
Sample B Female 16.3
Sample C Male 28.4
Sample D Male 22.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 93.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 93.0
Samples: 4

Max nTPM: 99.9
Min nTPM: 88.7
Sample A Male 91.9
Sample B Male 91.4
Sample C Female 88.7
Sample D Female 99.9
Hippocampal formation
nTPM: 73.2
Samples: 4

Max nTPM: 78.1
Min nTPM: 68.3
Sample A Male 78.1
Sample B Male 68.3
Sample C Female 70.9
Sample D Female 75.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.6
67979034 Antisense, RP_040923_02_B04, Mouse strain C57BL/6J (56 days, male) 2.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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