ABOUTMENU
HELP
NEWS
SRGN
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:48.2 nTPM
HPA:48.2 nTPM
GTEx:65.6 nTPM
FANTOM5:259.1 Scaled Tags Per Million
Pig:10.0 nTPM
Mouse:17.9 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000759
Glial cells High
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 48.2
Sample id Sample description nTPM
Hippocampus
nTPM: 47.9
1898 Male, age 80, left hemisphere 50.1
2621 Female, age 67, right hemisphere 49.6
1855 Male, age 76, left hemisphere 49.1
1911 Female, age 85, right hemisphere 47.5
2529 Female, age 94, left hemisphere 47.2
2148 Female, age 91, left hemisphere 43.6
Dentate gyrus
nTPM: 48.2
2010 Male, age 76, both hemispheres 59.4
2530 Female, age 94, left hemisphere 49.4
2528 Male, age 74, both hemispheres 46.6
2531 Female, age 67, both hemispheres 46.2
1927 Female, age 91, both hemispheres 45.2
2246 Female, age 85, both hemispheres 42.5
Entorhinal gyrus
nTPM: 43.9
1787 Male, age 76, left hemisphere 49.9
2117 Female, age 91, right hemisphere 46.7
2686 Male, age 75, right hemisphere 42.9
1938 Female, age 85, left hemisphere 42.5
2764 Male, age 80, right hemisphere 41.1
2613 Female, age 94, left hemisphere 40.3
Hippocampus, CA1
nTPM: 46.3
2045 Male, age 76, both hemispheres 53.1
1873 Female, age 85, both hemispheres 46.3
2527 Male, age 74, both hemispheres 44.2
2082 Female, age 91, right hemisphere 44.1
2749 Male, age 80, left hemisphere 43.8
Hippocampus, CA2
nTPM: 48.0
1892 Male, age 76, both hemispheres 50.3
2437 Female, age 94, left hemisphere 50.1
1940 Female, age 85, left hemisphere 49.3
1963 Male, age 80, left hemisphere 47.3
2249 Male, age 74, both hemispheres 46.2
2113 Female, age 91, right hemisphere 44.9
Hippocampus, CA3
nTPM: 47.8
1867 Male, age 76, both hemispheres 57.1
2861 Female, age 67, both hemispheres 49.1
2137 Male, age 80, left hemisphere 46.6
1891 Female, age 85, both hemispheres 46.5
2436 Male, age 74, both hemispheres 46.3
2620 Female, age 94, left hemisphere 41.1
Parahippocampal cortex
nTPM: 45.4
2018 Male, age 76, both hemispheres 64.3
2250 Female, age 67, right hemisphere 48.8
1990 Female, age 91, right hemisphere 44.5
2245 Female, age 91, both hemispheres 43.5
1850 Male, age 80, both hemispheres 43.2
1933 Female, age 85, both hemispheres 42.7
2693 Female, age 94, both hemispheres 42.4
2532 Female, age 72, left hemisphere 42.0
2622 Female, age 67, right hemisphere 42.0
2692 Male, age 74, both hemispheres 40.6
Perirhinal gyrus
nTPM: 44.4
1841 Female, age 85, right hemisphere 46.5
2521 Female, age 94, right hemisphere 46.2
2848 Male, age 76, right hemisphere 43.6
1847 Female, age 91, left hemisphere 43.1
1794 Male, age 80, right hemisphere 42.6
Subiculum
nTPM: 47.2
2042 Male, age 76, both hemispheres 60.1
2729 Female, age 91, right hemisphere 46.4
1901 Male, age 80, both hemispheres 45.1
2438 Female, age 94, left hemisphere 44.5
2619 Male, age 74, both hemispheres 44.3
1977 Female, age 85, both hemispheres 42.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 65.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 65.6
Samples: 197

Max nTPM: 336.7
Min nTPM: 8.5
Std nTPM: 54.3
Median nTPM: 49.2
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 336.7
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 313.1
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 308.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 232.9
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 221.1
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 212.7
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 198.6
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 195.0
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 175.2
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 167.1
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 161.7
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 259.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 259.1
FF:10169-103B7 60 years, female 398.6
FF:10153-102I9 76 years, female 119.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 10.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 8.5
Samples: 4

Max nTPM: 13.5
Min nTPM: 6.0
Sample A Female 6.7
Sample B Female 6.0
Sample C Male 13.5
Sample D Male 7.9
Entorhinal cortex
nTPM: 8.0
Samples: 4

Max nTPM: 13.0
Min nTPM: 4.4
Sample A Female 4.8
Sample B Female 9.9
Sample C Male 13.0
Sample D Male 4.4
Subiculum
nTPM: 10.0
Samples: 4

Max nTPM: 11.6
Min nTPM: 8.7
Sample A Female 8.7
Sample B Female 8.7
Sample C Male 11.0
Sample D Male 11.6
Ventral hippocampus
nTPM: 7.8
Samples: 4

Max nTPM: 10.6
Min nTPM: 6.0
Sample A Female 6.0
Sample B Female 7.3
Sample C Male 10.6
Sample D Male 7.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 17.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.9
Samples: 4

Max nTPM: 19.0
Min nTPM: 16.8
Sample A Male 17.0
Sample B Male 16.8
Sample C Female 19.0
Sample D Female 18.9
Hippocampal formation
nTPM: 14.3
Samples: 4

Max nTPM: 19.3
Min nTPM: 11.7
Sample A Male 13.0
Sample B Male 13.1
Sample C Female 11.7
Sample D Female 19.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
68191294 Antisense, RP_041123_02_C08, Mouse strain C57BL/6J (56 days, male) 0.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.