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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:28.7 nTPM
HPA:28.7 nTPM
GTEx:36.4 nTPM
FANTOM5:24.9 Scaled Tags Per Million
Pig:15.2 nTPM
Mouse:33.8 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA015599
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 28.7
Sample id Sample description nTPM
Hippocampus
nTPM: 27.0
1898 Male, age 80, left hemisphere 29.8
1911 Female, age 85, right hemisphere 27.6
2529 Female, age 94, left hemisphere 26.9
1855 Male, age 76, left hemisphere 26.7
2621 Female, age 67, right hemisphere 26.1
2148 Female, age 91, left hemisphere 24.7
Dentate gyrus
nTPM: 27.2
2530 Female, age 94, left hemisphere 31.5
2528 Male, age 74, both hemispheres 29.2
2010 Male, age 76, both hemispheres 29.0
1927 Female, age 91, both hemispheres 26.5
2246 Female, age 85, both hemispheres 24.2
2531 Female, age 67, both hemispheres 23.0
Entorhinal gyrus
nTPM: 25.1
2117 Female, age 91, right hemisphere 31.3
2764 Male, age 80, right hemisphere 26.5
1938 Female, age 85, left hemisphere 24.0
2613 Female, age 94, left hemisphere 23.9
1787 Male, age 76, left hemisphere 23.3
2686 Male, age 75, right hemisphere 21.7
Hippocampus, CA1
nTPM: 28.0
2749 Male, age 80, left hemisphere 35.9
1873 Female, age 85, both hemispheres 28.2
2527 Male, age 74, both hemispheres 27.6
2082 Female, age 91, right hemisphere 25.7
2045 Male, age 76, both hemispheres 22.4
Hippocampus, CA2
nTPM: 28.7
1963 Male, age 80, left hemisphere 34.4
2249 Male, age 74, both hemispheres 31.7
1892 Male, age 76, both hemispheres 28.6
1940 Female, age 85, left hemisphere 26.8
2437 Female, age 94, left hemisphere 25.7
2113 Female, age 91, right hemisphere 25.2
Hippocampus, CA3
nTPM: 26.1
2137 Male, age 80, left hemisphere 29.8
2436 Male, age 74, both hemispheres 28.1
1891 Female, age 85, both hemispheres 26.4
1867 Male, age 76, both hemispheres 25.9
2620 Female, age 94, left hemisphere 25.7
2861 Female, age 67, both hemispheres 20.9
Parahippocampal cortex
nTPM: 23.1
1990 Female, age 91, right hemisphere 25.2
2250 Female, age 67, right hemisphere 24.3
2245 Female, age 91, both hemispheres 23.7
1933 Female, age 85, both hemispheres 23.6
1850 Male, age 80, both hemispheres 23.5
2532 Female, age 72, left hemisphere 23.1
2018 Male, age 76, both hemispheres 22.9
2692 Male, age 74, both hemispheres 22.8
2693 Female, age 94, both hemispheres 21.9
2622 Female, age 67, right hemisphere 20.1
Perirhinal gyrus
nTPM: 23.0
1794 Male, age 80, right hemisphere 25.0
2521 Female, age 94, right hemisphere 24.2
1847 Female, age 91, left hemisphere 22.3
1841 Female, age 85, right hemisphere 22.1
2848 Male, age 76, right hemisphere 21.3
Subiculum
nTPM: 26.3
2042 Male, age 76, both hemispheres 29.3
1901 Male, age 80, both hemispheres 28.1
2729 Female, age 91, right hemisphere 26.8
2619 Male, age 74, both hemispheres 26.5
1977 Female, age 85, both hemispheres 26.1
2438 Female, age 94, left hemisphere 21.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 36.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 36.4
Samples: 197

Max nTPM: 65.5
Min nTPM: 18.1
Std nTPM: 8.3
Median nTPM: 35.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 65.5
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 58.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 57.5
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 54.7
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 54.1
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 53.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 52.7
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 52.5
GTEX-1H1CY-0011-R1a-SM-CKZOZ 60-69 years, female 52.1
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 51.3
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 49.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 24.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 24.9
FF:10153-102I9 76 years, female 29.9
FF:10169-103B7 60 years, female 19.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 14.2
Samples: 4

Max nTPM: 17.5
Min nTPM: 8.6
Sample A Female 17.5
Sample B Female 14.0
Sample C Male 16.5
Sample D Male 8.6
Entorhinal cortex
nTPM: 14.2
Samples: 4

Max nTPM: 16.2
Min nTPM: 12.2
Sample A Female 13.7
Sample B Female 16.2
Sample C Male 14.8
Sample D Male 12.2
Subiculum
nTPM: 15.3
Samples: 4

Max nTPM: 18.2
Min nTPM: 13.2
Sample A Female 18.2
Sample B Female 14.3
Sample C Male 15.4
Sample D Male 13.2
Ventral hippocampus
nTPM: 14.8
Samples: 4

Max nTPM: 19.2
Min nTPM: 11.4
Sample A Female 14.0
Sample B Female 11.4
Sample C Male 19.2
Sample D Male 14.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 33.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 27.3
Samples: 4

Max nTPM: 28.9
Min nTPM: 25.6
Sample A Male 25.6
Sample B Male 28.4
Sample C Female 28.9
Sample D Female 26.1
Hippocampal formation
nTPM: 33.9
Samples: 4

Max nTPM: 37.4
Min nTPM: 30.0
Sample A Male 32.0
Sample B Male 30.0
Sample C Female 37.4
Sample D Female 36.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
69782975 Antisense, RP_050505_04_B04, Mouse strain C57BL/6J (56 days, male) 0.2

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