ABOUTMENU
HELP
NEWS
EMC3
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:29.2 nTPM
HPA:29.2 nTPM
GTEx:21.3 nTPM
FANTOM5:58.6 Scaled Tags Per Million
Pig:15.5 nTPM
Mouse:75.3 nTPM
Allen mouse:3.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042372
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 29.2
Sample id Sample description nTPM
Hippocampus
nTPM: 26.6
1898 Male, age 80, left hemisphere 30.1
1855 Male, age 76, left hemisphere 28.1
2529 Female, age 94, left hemisphere 27.6
2148 Female, age 91, left hemisphere 25.4
2621 Female, age 67, right hemisphere 24.6
1911 Female, age 85, right hemisphere 24.2
Dentate gyrus
nTPM: 27.0
1927 Female, age 91, both hemispheres 28.0
2010 Male, age 76, both hemispheres 27.5
2528 Male, age 74, both hemispheres 26.9
2246 Female, age 85, both hemispheres 26.8
2531 Female, age 67, both hemispheres 26.5
2530 Female, age 94, left hemisphere 26.3
Entorhinal gyrus
nTPM: 25.3
2764 Male, age 80, right hemisphere 27.8
1938 Female, age 85, left hemisphere 25.4
2613 Female, age 94, left hemisphere 25.4
2686 Male, age 75, right hemisphere 25.1
1787 Male, age 76, left hemisphere 24.5
2117 Female, age 91, right hemisphere 23.6
Hippocampus, CA1
nTPM: 29.2
2749 Male, age 80, left hemisphere 35.8
2045 Male, age 76, both hemispheres 28.8
2527 Male, age 74, both hemispheres 28.3
2082 Female, age 91, right hemisphere 27.0
1873 Female, age 85, both hemispheres 26.1
Hippocampus, CA2
nTPM: 27.6
1892 Male, age 76, both hemispheres 29.8
2249 Male, age 74, both hemispheres 28.9
2113 Female, age 91, right hemisphere 27.1
1963 Male, age 80, left hemisphere 26.8
1940 Female, age 85, left hemisphere 26.5
2437 Female, age 94, left hemisphere 26.3
Hippocampus, CA3
nTPM: 26.2
2436 Male, age 74, both hemispheres 27.3
2137 Male, age 80, left hemisphere 27.2
2620 Female, age 94, left hemisphere 27.1
1867 Male, age 76, both hemispheres 26.7
1891 Female, age 85, both hemispheres 25.2
2861 Female, age 67, both hemispheres 23.5
Parahippocampal cortex
nTPM: 26.1
1850 Male, age 80, both hemispheres 28.1
2532 Female, age 72, left hemisphere 28.1
2692 Male, age 74, both hemispheres 27.3
1933 Female, age 85, both hemispheres 26.9
1990 Female, age 91, right hemisphere 26.4
2250 Female, age 67, right hemisphere 25.6
2245 Female, age 91, both hemispheres 24.8
2622 Female, age 67, right hemisphere 24.8
2018 Male, age 76, both hemispheres 24.5
2693 Female, age 94, both hemispheres 24.4
Perirhinal gyrus
nTPM: 27.7
1847 Female, age 91, left hemisphere 29.8
1841 Female, age 85, right hemisphere 28.0
1794 Male, age 80, right hemisphere 27.6
2521 Female, age 94, right hemisphere 26.8
2848 Male, age 76, right hemisphere 26.1
Subiculum
nTPM: 25.1
1901 Male, age 80, both hemispheres 27.2
2729 Female, age 91, right hemisphere 26.1
1977 Female, age 85, both hemispheres 25.6
2042 Male, age 76, both hemispheres 25.5
2619 Male, age 74, both hemispheres 25.0
2438 Female, age 94, left hemisphere 21.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 21.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.3
Samples: 197

Max nTPM: 36.7
Min nTPM: 9.8
Std nTPM: 5.1
Median nTPM: 21.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 36.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 36.6
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 35.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 33.7
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 32.9
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 32.3
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 32.1
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 32.0
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 31.1
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 30.2
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 30.2
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 58.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 58.6
FF:10169-103B7 60 years, female 64.8
FF:10153-102I9 76 years, female 52.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 15.6
Samples: 4

Max nTPM: 20.5
Min nTPM: 12.3
Sample A Female 20.5
Sample B Female 15.0
Sample C Male 14.4
Sample D Male 12.3
Entorhinal cortex
nTPM: 14.3
Samples: 4

Max nTPM: 17.8
Min nTPM: 10.9
Sample A Female 14.2
Sample B Female 17.8
Sample C Male 14.2
Sample D Male 10.9
Subiculum
nTPM: 13.3
Samples: 4

Max nTPM: 16.2
Min nTPM: 11.9
Sample A Female 16.2
Sample B Female 12.8
Sample C Male 12.1
Sample D Male 11.9
Ventral hippocampus
nTPM: 14.2
Samples: 4

Max nTPM: 15.2
Min nTPM: 11.5
Sample A Female 15.2
Sample B Female 11.5
Sample C Male 14.9
Sample D Male 15.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 75.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 73.0
Samples: 4

Max nTPM: 78.4
Min nTPM: 70.0
Sample A Male 70.7
Sample B Male 72.7
Sample C Female 78.4
Sample D Female 70.0
Hippocampal formation
nTPM: 75.3
Samples: 4

Max nTPM: 76.9
Min nTPM: 72.2
Sample A Male 76.9
Sample B Male 72.2
Sample C Female 76.4
Sample D Female 75.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.3
67978660 Antisense, RP_040923_01_D12, Mouse strain C57BL/6J (56 days, male) 3.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.