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PPDPF
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:164.7 nTPM
HPA:164.7 nTPM
GTEx:205.2 nTPM
FANTOM5:376.8 Scaled Tags Per Million
Pig:52.1 nTPM
Mouse:65.2 nTPM
Allen mouse:1.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 164.7
Sample id Sample description nTPM
Hippocampus
nTPM: 151.3
2529 Female, age 94, left hemisphere 176.7
1855 Male, age 76, left hemisphere 160.9
2621 Female, age 67, right hemisphere 154.1
1898 Male, age 80, left hemisphere 150.4
1911 Female, age 85, right hemisphere 133.0
2148 Female, age 91, left hemisphere 132.5
Dentate gyrus
nTPM: 150.4
2530 Female, age 94, left hemisphere 188.7
2010 Male, age 76, both hemispheres 166.2
2246 Female, age 85, both hemispheres 150.0
2531 Female, age 67, both hemispheres 149.5
2528 Male, age 74, both hemispheres 139.4
1927 Female, age 91, both hemispheres 108.5
Entorhinal gyrus
nTPM: 164.7
2764 Male, age 80, right hemisphere 183.3
2686 Male, age 75, right hemisphere 177.2
1787 Male, age 76, left hemisphere 168.9
2117 Female, age 91, right hemisphere 162.0
2613 Female, age 94, left hemisphere 153.1
1938 Female, age 85, left hemisphere 143.5
Hippocampus, CA1
nTPM: 140.5
2045 Male, age 76, both hemispheres 161.6
2527 Male, age 74, both hemispheres 139.4
1873 Female, age 85, both hemispheres 135.9
2749 Male, age 80, left hemisphere 135.5
2082 Female, age 91, right hemisphere 130.0
Hippocampus, CA2
nTPM: 131.6
2437 Female, age 94, left hemisphere 157.4
1940 Female, age 85, left hemisphere 139.4
1892 Male, age 76, both hemispheres 134.6
2113 Female, age 91, right hemisphere 131.3
2249 Male, age 74, both hemispheres 124.9
1963 Male, age 80, left hemisphere 101.9
Hippocampus, CA3
nTPM: 140.3
2861 Female, age 67, both hemispheres 157.8
2620 Female, age 94, left hemisphere 152.5
1867 Male, age 76, both hemispheres 141.0
2137 Male, age 80, left hemisphere 136.3
1891 Female, age 85, both hemispheres 128.8
2436 Male, age 74, both hemispheres 125.2
Parahippocampal cortex
nTPM: 152.6
2245 Female, age 91, both hemispheres 172.0
2018 Male, age 76, both hemispheres 170.7
2532 Female, age 72, left hemisphere 164.0
2622 Female, age 67, right hemisphere 159.9
1850 Male, age 80, both hemispheres 159.7
2692 Male, age 74, both hemispheres 154.8
1990 Female, age 91, right hemisphere 146.8
1933 Female, age 85, both hemispheres 139.6
2250 Female, age 67, right hemisphere 130.2
2693 Female, age 94, both hemispheres 128.2
Perirhinal gyrus
nTPM: 151.4
1794 Male, age 80, right hemisphere 180.6
2848 Male, age 76, right hemisphere 150.9
1841 Female, age 85, right hemisphere 146.4
2521 Female, age 94, right hemisphere 140.6
1847 Female, age 91, left hemisphere 138.6
Subiculum
nTPM: 156.2
2042 Male, age 76, both hemispheres 178.4
2619 Male, age 74, both hemispheres 176.4
2438 Female, age 94, left hemisphere 159.4
1901 Male, age 80, both hemispheres 155.3
1977 Female, age 85, both hemispheres 148.0
2729 Female, age 91, right hemisphere 119.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 205.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 205.2
Samples: 197

Max nTPM: 540.5
Min nTPM: 76.9
Std nTPM: 67.1
Median nTPM: 193.6
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 540.5
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 468.9
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 450.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 371.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 364.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 361.4
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 356.5
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 352.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 337.8
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 329.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 325.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 376.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 376.8
FF:10169-103B7 60 years, female 434.2
FF:10153-102I9 76 years, female 319.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 52.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 51.7
Samples: 4

Max nTPM: 68.4
Min nTPM: 35.9
Sample A Female 68.4
Sample B Female 44.1
Sample C Male 58.2
Sample D Male 35.9
Entorhinal cortex
nTPM: 46.6
Samples: 4

Max nTPM: 57.4
Min nTPM: 38.1
Sample A Female 48.8
Sample B Female 41.9
Sample C Male 57.4
Sample D Male 38.1
Subiculum
nTPM: 48.3
Samples: 4

Max nTPM: 62.3
Min nTPM: 42.9
Sample A Female 62.3
Sample B Female 44.7
Sample C Male 43.2
Sample D Male 42.9
Ventral hippocampus
nTPM: 52.1
Samples: 4

Max nTPM: 66.8
Min nTPM: 42.0
Sample A Female 54.7
Sample B Female 42.0
Sample C Male 66.8
Sample D Male 44.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 65.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 56.6
Samples: 4

Max nTPM: 58.5
Min nTPM: 54.5
Sample A Male 58.5
Sample B Male 57.1
Sample C Female 54.5
Sample D Female 56.4
Hippocampal formation
nTPM: 65.2
Samples: 4

Max nTPM: 75.6
Min nTPM: 48.4
Sample A Male 63.7
Sample B Male 48.4
Sample C Female 73.1
Sample D Female 75.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.7
68919880 Antisense, RP_050301_02_F11, Mouse strain C57BL/6J (56 days, male) 1.7

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