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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:24.7 nTPM
HPA:24.7 nTPM
GTEx:35.5 nTPM
FANTOM5:14.5 Scaled Tags Per Million
Pig:35.0 nTPM
Mouse:91.9 nTPM
Allen mouse:1.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA034948
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 24.7
Sample id Sample description nTPM
Hippocampus
nTPM: 23.5
2621 Female, age 67, right hemisphere 28.8
1898 Male, age 80, left hemisphere 24.5
2148 Female, age 91, left hemisphere 24.3
2529 Female, age 94, left hemisphere 21.8
1855 Male, age 76, left hemisphere 21.2
1911 Female, age 85, right hemisphere 20.5
Dentate gyrus
nTPM: 22.5
1927 Female, age 91, both hemispheres 30.4
2530 Female, age 94, left hemisphere 27.3
2531 Female, age 67, both hemispheres 21.9
2246 Female, age 85, both hemispheres 18.8
2528 Male, age 74, both hemispheres 18.8
2010 Male, age 76, both hemispheres 18.1
Entorhinal gyrus
nTPM: 24.7
2613 Female, age 94, left hemisphere 35.7
2686 Male, age 75, right hemisphere 26.2
2764 Male, age 80, right hemisphere 24.5
1938 Female, age 85, left hemisphere 22.9
1787 Male, age 76, left hemisphere 21.7
2117 Female, age 91, right hemisphere 17.2
Hippocampus, CA1
nTPM: 24.6
2749 Male, age 80, left hemisphere 40.2
2527 Male, age 74, both hemispheres 23.3
2082 Female, age 91, right hemisphere 21.5
1873 Female, age 85, both hemispheres 21.0
2045 Male, age 76, both hemispheres 16.9
Hippocampus, CA2
nTPM: 23.9
1963 Male, age 80, left hemisphere 32.6
2437 Female, age 94, left hemisphere 26.1
1892 Male, age 76, both hemispheres 25.3
2113 Female, age 91, right hemisphere 21.2
1940 Female, age 85, left hemisphere 19.3
2249 Male, age 74, both hemispheres 18.7
Hippocampus, CA3
nTPM: 23.8
2137 Male, age 80, left hemisphere 35.7
2861 Female, age 67, both hemispheres 28.8
1867 Male, age 76, both hemispheres 21.9
2620 Female, age 94, left hemisphere 20.3
1891 Female, age 85, both hemispheres 18.3
2436 Male, age 74, both hemispheres 18.1
Parahippocampal cortex
nTPM: 23.4
2245 Female, age 91, both hemispheres 29.8
2622 Female, age 67, right hemisphere 27.8
2693 Female, age 94, both hemispheres 24.4
1850 Male, age 80, both hemispheres 23.5
2692 Male, age 74, both hemispheres 22.4
2532 Female, age 72, left hemisphere 22.2
1990 Female, age 91, right hemisphere 22.0
1933 Female, age 85, both hemispheres 21.7
2250 Female, age 67, right hemisphere 21.6
2018 Male, age 76, both hemispheres 19.1
Perirhinal gyrus
nTPM: 24.1
1847 Female, age 91, left hemisphere 27.5
2521 Female, age 94, right hemisphere 26.7
1794 Male, age 80, right hemisphere 24.4
1841 Female, age 85, right hemisphere 21.6
2848 Male, age 76, right hemisphere 20.1
Subiculum
nTPM: 20.9
1901 Male, age 80, both hemispheres 24.7
2438 Female, age 94, left hemisphere 23.5
2619 Male, age 74, both hemispheres 21.7
1977 Female, age 85, both hemispheres 21.5
2729 Female, age 91, right hemisphere 17.4
2042 Male, age 76, both hemispheres 16.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 35.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 35.5
Samples: 197

Max nTPM: 162.0
Min nTPM: 2.2
Std nTPM: 20.3
Median nTPM: 34.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 162.0
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 118.4
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 91.9
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 78.9
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 75.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 74.9
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 74.8
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 73.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 72.7
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 71.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 70.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 14.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 14.5
FF:10153-102I9 76 years, female 16.5
FF:10169-103B7 60 years, female 12.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 35.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 30.5
Samples: 4

Max nTPM: 37.9
Min nTPM: 24.1
Sample A Female 37.9
Sample B Female 30.4
Sample C Male 29.6
Sample D Male 24.1
Entorhinal cortex
nTPM: 35.0
Samples: 4

Max nTPM: 37.2
Min nTPM: 30.6
Sample A Female 36.9
Sample B Female 35.4
Sample C Male 37.2
Sample D Male 30.6
Subiculum
nTPM: 30.2
Samples: 4

Max nTPM: 40.3
Min nTPM: 26.0
Sample A Female 40.3
Sample B Female 26.3
Sample C Male 28.2
Sample D Male 26.0
Ventral hippocampus
nTPM: 28.9
Samples: 4

Max nTPM: 37.3
Min nTPM: 20.3
Sample A Female 26.9
Sample B Female 20.3
Sample C Male 37.3
Sample D Male 31.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 91.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 91.9
Samples: 4

Max nTPM: 96.7
Min nTPM: 87.0
Sample A Male 90.9
Sample B Male 96.7
Sample C Female 93.1
Sample D Female 87.0
Hippocampal formation
nTPM: 78.4
Samples: 4

Max nTPM: 83.4
Min nTPM: 75.7
Sample A Male 83.4
Sample B Male 76.1
Sample C Female 75.7
Sample D Female 78.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.0
68148750 Antisense, RP_041116_02_B02, Mouse strain C57BL/6J (56 days, male) 1.7
909 Antisense, RP_Baylor_103010, Mouse strain C57BL/6J (56 days, male) 0.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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