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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:73.1 nTPM
HPA:73.1 nTPM
GTEx:51.4 nTPM
FANTOM5:35.3 Scaled Tags Per Million
Pig:19.6 nTPM
Mouse:47.7 nTPM
Allen mouse:1.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027468Antibody HPA028668
Glial cells Not detectedNot detected
Neuronal cells LowNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 73.1
Sample id Sample description nTPM
Hippocampus
nTPM: 72.2
1898 Male, age 80, left hemisphere 76.9
2529 Female, age 94, left hemisphere 73.6
1855 Male, age 76, left hemisphere 71.6
2621 Female, age 67, right hemisphere 71.2
2148 Female, age 91, left hemisphere 71.0
1911 Female, age 85, right hemisphere 68.8
Dentate gyrus
nTPM: 70.4
1927 Female, age 91, both hemispheres 72.3
2530 Female, age 94, left hemisphere 71.2
2010 Male, age 76, both hemispheres 70.5
2528 Male, age 74, both hemispheres 69.9
2531 Female, age 67, both hemispheres 69.4
2246 Female, age 85, both hemispheres 68.8
Entorhinal gyrus
nTPM: 71.6
2764 Male, age 80, right hemisphere 74.8
1938 Female, age 85, left hemisphere 73.5
2117 Female, age 91, right hemisphere 71.1
2686 Male, age 75, right hemisphere 70.6
1787 Male, age 76, left hemisphere 70.5
2613 Female, age 94, left hemisphere 69.1
Hippocampus, CA1
nTPM: 72.2
2749 Male, age 80, left hemisphere 78.3
1873 Female, age 85, both hemispheres 72.7
2045 Male, age 76, both hemispheres 70.6
2527 Male, age 74, both hemispheres 70.3
2082 Female, age 91, right hemisphere 69.1
Hippocampus, CA2
nTPM: 71.5
1892 Male, age 76, both hemispheres 75.6
1963 Male, age 80, left hemisphere 75.1
2249 Male, age 74, both hemispheres 72.0
2113 Female, age 91, right hemisphere 68.8
1940 Female, age 85, left hemisphere 68.7
2437 Female, age 94, left hemisphere 68.6
Hippocampus, CA3
nTPM: 71.7
2137 Male, age 80, left hemisphere 73.1
2436 Male, age 74, both hemispheres 73.1
2620 Female, age 94, left hemisphere 73.1
1867 Male, age 76, both hemispheres 72.2
1891 Female, age 85, both hemispheres 70.0
2861 Female, age 67, both hemispheres 69.0
Parahippocampal cortex
nTPM: 70.2
1850 Male, age 80, both hemispheres 75.5
1933 Female, age 85, both hemispheres 71.9
1990 Female, age 91, right hemisphere 71.1
2245 Female, age 91, both hemispheres 71.1
2532 Female, age 72, left hemisphere 70.4
2692 Male, age 74, both hemispheres 69.3
2250 Female, age 67, right hemisphere 69.1
2018 Male, age 76, both hemispheres 68.1
2693 Female, age 94, both hemispheres 67.7
2622 Female, age 67, right hemisphere 67.5
Perirhinal gyrus
nTPM: 73.1
1794 Male, age 80, right hemisphere 77.0
1847 Female, age 91, left hemisphere 76.7
1841 Female, age 85, right hemisphere 72.7
2848 Male, age 76, right hemisphere 70.0
2521 Female, age 94, right hemisphere 69.3
Subiculum
nTPM: 71.0
2438 Female, age 94, left hemisphere 75.3
1977 Female, age 85, both hemispheres 72.3
1901 Male, age 80, both hemispheres 71.4
2619 Male, age 74, both hemispheres 70.5
2729 Female, age 91, right hemisphere 68.7
2042 Male, age 76, both hemispheres 67.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 51.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 51.4
Samples: 197

Max nTPM: 96.3
Min nTPM: 19.5
Std nTPM: 11.6
Median nTPM: 50.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 96.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 92.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 84.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 80.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 77.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 72.5
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 72.3
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 71.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 71.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 70.9
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 69.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 35.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 35.3
FF:10169-103B7 60 years, female 44.9
FF:10153-102I9 76 years, female 25.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 19.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 19.6
Samples: 4

Max nTPM: 27.3
Min nTPM: 14.2
Sample A Female 27.3
Sample B Female 20.0
Sample C Male 16.9
Sample D Male 14.2
Entorhinal cortex
nTPM: 16.6
Samples: 4

Max nTPM: 18.8
Min nTPM: 13.0
Sample A Female 16.1
Sample B Female 18.6
Sample C Male 18.8
Sample D Male 13.0
Subiculum
nTPM: 16.5
Samples: 4

Max nTPM: 21.1
Min nTPM: 14.3
Sample A Female 21.1
Sample B Female 16.0
Sample C Male 14.6
Sample D Male 14.3
Ventral hippocampus
nTPM: 18.3
Samples: 4

Max nTPM: 21.1
Min nTPM: 15.3
Sample A Female 17.7
Sample B Female 15.3
Sample C Male 21.1
Sample D Male 19.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 47.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 42.9
Samples: 4

Max nTPM: 46.0
Min nTPM: 39.6
Sample A Male 45.5
Sample B Male 40.4
Sample C Female 46.0
Sample D Female 39.6
Hippocampal formation
nTPM: 47.8
Samples: 4

Max nTPM: 54.5
Min nTPM: 42.0
Sample A Male 42.0
Sample B Male 45.0
Sample C Female 49.6
Sample D Female 54.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.7
74581008 Antisense, RP_060215_02_D02, Mouse strain C57BL/6J (56 days, male) 1.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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