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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:127.8 nTPM
HPA:127.8 nTPM
GTEx:100.9 nTPM
FANTOM5:53.1 Scaled Tags Per Million
Pig:26.1 nTPM
Mouse:139.2 nTPM
Allen mouse:8.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA010134Antibody HPA017068
Glial cells Not detectedLow
Neuronal cells Not detectedHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 127.8
Sample id Sample description nTPM
Hippocampus
nTPM: 126.6
1898 Male, age 80, left hemisphere 130.4
2148 Female, age 91, left hemisphere 128.8
2621 Female, age 67, right hemisphere 128.6
2529 Female, age 94, left hemisphere 126.2
1911 Female, age 85, right hemisphere 122.9
1855 Male, age 76, left hemisphere 122.6
Dentate gyrus
nTPM: 126.3
2530 Female, age 94, left hemisphere 134.0
1927 Female, age 91, both hemispheres 130.4
2528 Male, age 74, both hemispheres 125.8
2010 Male, age 76, both hemispheres 123.0
2246 Female, age 85, both hemispheres 122.9
2531 Female, age 67, both hemispheres 121.5
Entorhinal gyrus
nTPM: 124.8
2764 Male, age 80, right hemisphere 127.6
1787 Male, age 76, left hemisphere 126.5
1938 Female, age 85, left hemisphere 124.5
2686 Male, age 75, right hemisphere 124.0
2613 Female, age 94, left hemisphere 123.7
2117 Female, age 91, right hemisphere 122.3
Hippocampus, CA1
nTPM: 126.2
2749 Male, age 80, left hemisphere 137.5
2527 Male, age 74, both hemispheres 128.5
1873 Female, age 85, both hemispheres 124.7
2082 Female, age 91, right hemisphere 121.7
2045 Male, age 76, both hemispheres 118.4
Hippocampus, CA2
nTPM: 127.2
2437 Female, age 94, left hemisphere 133.8
1892 Male, age 76, both hemispheres 132.3
2249 Male, age 74, both hemispheres 128.4
1963 Male, age 80, left hemisphere 125.5
2113 Female, age 91, right hemisphere 122.3
1940 Female, age 85, left hemisphere 120.8
Hippocampus, CA3
nTPM: 127.3
2620 Female, age 94, left hemisphere 129.8
2137 Male, age 80, left hemisphere 128.5
2861 Female, age 67, both hemispheres 127.7
2436 Male, age 74, both hemispheres 127.0
1867 Male, age 76, both hemispheres 126.4
1891 Female, age 85, both hemispheres 124.5
Parahippocampal cortex
nTPM: 127.3
2245 Female, age 91, both hemispheres 130.2
2622 Female, age 67, right hemisphere 129.5
2250 Female, age 67, right hemisphere 128.8
1990 Female, age 91, right hemisphere 128.6
1850 Male, age 80, both hemispheres 128.5
2532 Female, age 72, left hemisphere 127.5
2692 Male, age 74, both hemispheres 127.2
2693 Female, age 94, both hemispheres 126.4
1933 Female, age 85, both hemispheres 124.7
2018 Male, age 76, both hemispheres 121.7
Perirhinal gyrus
nTPM: 127.8
1847 Female, age 91, left hemisphere 131.6
1794 Male, age 80, right hemisphere 130.3
1841 Female, age 85, right hemisphere 129.8
2521 Female, age 94, right hemisphere 124.3
2848 Male, age 76, right hemisphere 123.1
Subiculum
nTPM: 125.8
2619 Male, age 74, both hemispheres 131.0
2438 Female, age 94, left hemisphere 130.7
1901 Male, age 80, both hemispheres 127.6
1977 Female, age 85, both hemispheres 124.3
2042 Male, age 76, both hemispheres 120.8
2729 Female, age 91, right hemisphere 120.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 100.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 100.9
Samples: 197

Max nTPM: 186.3
Min nTPM: 49.4
Std nTPM: 22.4
Median nTPM: 98.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 186.3
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 168.0
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 162.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 160.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 158.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 154.1
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 145.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 144.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 143.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 141.7
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 141.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 53.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 53.1
FF:10169-103B7 60 years, female 53.3
FF:10153-102I9 76 years, female 53.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 26.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 26.1
Samples: 4

Max nTPM: 32.5
Min nTPM: 20.9
Sample A Female 32.5
Sample B Female 26.9
Sample C Male 24.0
Sample D Male 20.9
Entorhinal cortex
nTPM: 20.6
Samples: 4

Max nTPM: 22.6
Min nTPM: 18.4
Sample A Female 22.6
Sample B Female 21.8
Sample C Male 18.4
Sample D Male 19.6
Subiculum
nTPM: 16.8
Samples: 4

Max nTPM: 19.8
Min nTPM: 14.5
Sample A Female 19.8
Sample B Female 14.8
Sample C Male 17.9
Sample D Male 14.5
Ventral hippocampus
nTPM: 22.5
Samples: 4

Max nTPM: 31.7
Min nTPM: 14.1
Sample A Female 20.0
Sample B Female 14.1
Sample C Male 24.0
Sample D Male 31.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 139.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 117.6
Samples: 4

Max nTPM: 126.3
Min nTPM: 108.2
Sample A Male 126.3
Sample B Male 112.0
Sample C Female 124.0
Sample D Female 108.2
Hippocampal formation
nTPM: 139.2
Samples: 4

Max nTPM: 145.1
Min nTPM: 129.1
Sample A Male 129.1
Sample B Male 138.1
Sample C Female 145.1
Sample D Female 144.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.0
69262253 Antisense, RP_050301_02_A01, Mouse strain C57BL/6J (56 days, male) 9.1
73769326 Antisense, RP_051121_04_B11, Mouse strain C57BL/6J (56 days, male) 7.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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