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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:133.1 nTPM
HPA:133.1 nTPM
GTEx:101.1 nTPM
FANTOM5:26.4 Scaled Tags Per Million
Pig:42.9 nTPM
Mouse:83.2 nTPM
Allen mouse:1.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA021995Antibody HPA022476Antibody CAB003783
Glial cells MediumMediumMedium
Neuronal cells MediumHighMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 133.1
Sample id Sample description nTPM
Hippocampus
nTPM: 126.1
1898 Male, age 80, left hemisphere 138.0
1855 Male, age 76, left hemisphere 125.5
2148 Female, age 91, left hemisphere 123.9
2529 Female, age 94, left hemisphere 123.9
1911 Female, age 85, right hemisphere 122.8
2621 Female, age 67, right hemisphere 122.3
Dentate gyrus
nTPM: 125.2
2010 Male, age 76, both hemispheres 132.7
1927 Female, age 91, both hemispheres 130.3
2528 Male, age 74, both hemispheres 125.8
2530 Female, age 94, left hemisphere 125.1
2246 Female, age 85, both hemispheres 121.7
2531 Female, age 67, both hemispheres 115.6
Entorhinal gyrus
nTPM: 125.7
2764 Male, age 80, right hemisphere 131.9
2117 Female, age 91, right hemisphere 130.8
1938 Female, age 85, left hemisphere 126.4
1787 Male, age 76, left hemisphere 123.6
2613 Female, age 94, left hemisphere 121.4
2686 Male, age 75, right hemisphere 120.0
Hippocampus, CA1
nTPM: 133.1
2749 Male, age 80, left hemisphere 154.5
1873 Female, age 85, both hemispheres 133.4
2527 Male, age 74, both hemispheres 129.4
2082 Female, age 91, right hemisphere 124.7
2045 Male, age 76, both hemispheres 123.8
Hippocampus, CA2
nTPM: 130.4
1963 Male, age 80, left hemisphere 143.4
1892 Male, age 76, both hemispheres 138.5
2249 Male, age 74, both hemispheres 132.1
2113 Female, age 91, right hemisphere 125.4
1940 Female, age 85, left hemisphere 121.7
2437 Female, age 94, left hemisphere 121.1
Hippocampus, CA3
nTPM: 126.6
2137 Male, age 80, left hemisphere 137.4
2436 Male, age 74, both hemispheres 133.8
1867 Male, age 76, both hemispheres 131.5
1891 Female, age 85, both hemispheres 124.2
2620 Female, age 94, left hemisphere 116.5
2861 Female, age 67, both hemispheres 116.2
Parahippocampal cortex
nTPM: 124.2
1990 Female, age 91, right hemisphere 128.5
1850 Male, age 80, both hemispheres 128.3
1933 Female, age 85, both hemispheres 127.3
2018 Male, age 76, both hemispheres 125.7
2250 Female, age 67, right hemisphere 123.8
2245 Female, age 91, both hemispheres 123.4
2692 Male, age 74, both hemispheres 122.8
2622 Female, age 67, right hemisphere 122.1
2693 Female, age 94, both hemispheres 120.7
2532 Female, age 72, left hemisphere 119.7
Perirhinal gyrus
nTPM: 126.9
1847 Female, age 91, left hemisphere 136.6
1794 Male, age 80, right hemisphere 129.7
1841 Female, age 85, right hemisphere 125.2
2521 Female, age 94, right hemisphere 122.2
2848 Male, age 76, right hemisphere 120.8
Subiculum
nTPM: 124.1
1901 Male, age 80, both hemispheres 129.1
1977 Female, age 85, both hemispheres 126.6
2619 Male, age 74, both hemispheres 126.3
2729 Female, age 91, right hemisphere 124.8
2042 Male, age 76, both hemispheres 121.4
2438 Female, age 94, left hemisphere 116.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 101.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 101.1
Samples: 197

Max nTPM: 198.5
Min nTPM: 40.7
Std nTPM: 24.7
Median nTPM: 97.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 198.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 184.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 174.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 173.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 171.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 162.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 154.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 154.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 147.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 145.6
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 144.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 26.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 26.4
FF:10153-102I9 76 years, female 35.0
FF:10169-103B7 60 years, female 17.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 42.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 42.9
Samples: 4

Max nTPM: 60.9
Min nTPM: 30.9
Sample A Female 60.9
Sample B Female 37.7
Sample C Male 42.0
Sample D Male 30.9
Entorhinal cortex
nTPM: 39.2
Samples: 4

Max nTPM: 47.1
Min nTPM: 28.8
Sample A Female 36.2
Sample B Female 47.1
Sample C Male 44.6
Sample D Male 28.8
Subiculum
nTPM: 38.7
Samples: 4

Max nTPM: 52.0
Min nTPM: 32.7
Sample A Female 52.0
Sample B Female 37.1
Sample C Male 33.1
Sample D Male 32.7
Ventral hippocampus
nTPM: 42.3
Samples: 4

Max nTPM: 50.8
Min nTPM: 35.7
Sample A Female 46.2
Sample B Female 35.7
Sample C Male 50.8
Sample D Male 36.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 83.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 79.4
Samples: 4

Max nTPM: 85.1
Min nTPM: 73.8
Sample A Male 80.9
Sample B Male 77.6
Sample C Female 85.1
Sample D Female 73.8
Hippocampal formation
nTPM: 83.2
Samples: 4

Max nTPM: 92.7
Min nTPM: 76.1
Sample A Male 92.7
Sample B Male 76.1
Sample C Female 80.3
Sample D Female 83.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.5
69671869 Antisense, RP_050428_02_E06, Mouse strain C57BL/6J (56 days, male) 1.5

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